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Peptidases • Bacillariophyta
Annotations/GenomesFracy1Phatr2Psemu1Thaoce1Thaps3TotalAnnotation Description
Merops
3702433272662921,498
77710536Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
1214Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on periplasmic side of cell membrane.
5431316Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
112Water nucleophile; water bound by two Asp
11Water nucleophile; water bound by Asp and His; all membrane-bound endopeptidases known only from eubacteria with active site on periplasmic side of cell membrane.
4326402829166Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
7262522Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
4133112Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
3115Cysteine nucleophile; catalytic residues in the order Glu, Cys, His in sequence
2141311Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
9778940Families of peptidase inhibitors not assigned to clans
11
325
112
11
11
1113Families of metallopeptidases not assigned to clans
2718171722101Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
334212Water nucleophile; water bound by single zinc ion ligated to His, Glu (within the motif HXXE) and His
1233312Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HXXEH) and Glu
5433217Water nucleophile; water bound by two zinc ions ligated by Lys, Asp, Asp, Asp, Glu
9676735Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
971051041Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
4442317Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
323311Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Asp; membrane proteins with intramembrane active site.
11Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motifs HXXXD and HXH)
5453623Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
213Asparagine nucleophile; catalytic residues in the order Asp, Asn in sequence; all self-processing endopeptidases
336302128118Serine or cysteine nucleophile; catalytic residues in the order His, Asp, Ser (or Cys) in sequence; all endopeptidases
3329303929160Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
8457428Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
123Serine or threonine nucleophile; N-terminal nucleophile
81054633Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
9260825968361Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
412613Serine nucleophile; catalytic residues in the order Ser, Lys (within the motif SXXK) in sequence
5362521Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
112217Serine nucleophile; catalytic residues in the order Ser, Lys in sequence
141216141066Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
11Serine nucleophile; catalytic residues in the order His, Ser within the motif HXS.
7111041042Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
108851243
11