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Peptidases • Trebouxiophyceae
Annotations/GenomesAstpho2Auxeprot1ChlNC64A_1Coc_C169_1Dicre1Picsp_1SymretAf1SymretSc1SymretSp1SymretSw1TotalAnnotation Description
Merops
2721933092713061662982943052812,695
4227119911964Water nucleophile; water bound by two Asp from monomer or dimer; all endopeptidases, from eukaryote organisms, viruses or virus-like organisms
333342444333Water nucleophile; water bound by two Asp; all membrane-bound endopeptidases known only from eubacteria with active site on cytoplasmic side of cell membrane.
111115Water nucleophile; water bound by two Asp
25172520241525232925228Cysteine nucleophile; catalytic residues in the order Cys, His, Asn (or Asp) in sequence
33163676742Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
31112323319Cysteine nucleophile; catalytic residues in the order His, Glu (or Asp), Cys in sequence
11111117Cysteine nucleophile; catalytic residues in the order Glu, Cys, His in sequence
1111116Cysteine nucleophile; catalytic residues in the order Cys, His, His in sequence
222131222219Cysteine nucleophile; catalytic residues in the order His, Cys in sequence
546654555550Families of peptidase inhibitors not assigned to clans
11
22
213
11111117
11
11111117
167
1212222214
332321112220Families of metallopeptidases not assigned to clans
118241115914151415136Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Glu, His or Asp
523432233229Water nucleophile; water bound by single zinc ion ligated to His, Glu (within the motif HXXE) and His
311261343327Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HXXEH) and Glu
13211111112Water nucleophile; water bound by two zinc ions ligated by Lys, Asp, Asp, Asp, Glu
667886888873Water nucleophile; water bound by two cobalt or manganese ions ligated by Asp, Asp, His, Glu, Glu
1358101231213121199Water nucleophile; water bound by two zinc ions ligated by His (or Asp), Asp, Glu, Asp (or Glu), His
65961161111121188Water nucleophile; water bound by two zinc ions ligated by His, His or Asp, Lys or Glu, His, His.
533422111123Water nucleophile; water bound by single zinc ion ligated to two His (within the motif HEXXH) and Asp; membrane proteins with intramembrane active site.
112Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motifs HXXXD and HXH)
834643454445Water nucleophile; water bound by single zinc ion ligated to two His and Asp (within the motif HSHP(X)9D)
111311111112Asparagine nucleophile; catalytic residues in the order Asp, Asn in sequence; all self-processing endopeptidases
42255812999790Serine or cysteine nucleophile; catalytic residues in the order His, Asp, Ser (or Cys) in sequence; all endopeptidases
28182521211825212421222Threonine, serine or cysteine nucleophile at the N-terminus of mature enzyme
11881064767673Serine or cysteine nucleophile; catalytic residues in the order Cys (or Ser), His, Glu in sequence.
41786632Cysteine nucleophile at the N-terminus of mature enzyme; catalytic residues in the order Cys, Thr, His
11111117Serine or threonine nucleophile; N-terminal nucleophile
8413672666664Serine nucleophile; catalytic residues in the order Asp, His, Ser in sequence in family S8, but family S53 differs
74617682894185848480756Serine nucleophile; catalytic residues in the order Ser, Asp, His in sequence
1213122113Serine nucleophile; catalytic residues in the order Ser, Lys (within the motif SXXK) in sequence
454663576551Serine nucleophile; catalytic residues in the order Ser, Lys (or His) in sequence
111115Serine nucleophile; catalytic residues in the order His, Ser, His in sequence
112212111113Serine nucleophile; catalytic residues in the order Ser, Lys in sequence
17101216191018151916152Serine nucleophile; catalytic residues in the order Ser, His, Asp in sequence
111115Serine nucleophile; catalytic residues in the order His, Ser within the motif HXS.
112Serine nucleophile; catalytic residues in the order Lys, Ser in sequence
855786887769Serine nucleophile; transmembrane protein with catalytic residues in the order Ser, His embedded in the membrane
11Families of peptidases of unknown catalytic mechanism not assigned to clans
4313874646358
11