PFAM Domains • Pelagophyta
Annotations/GenomesAuran1Pelago2097_1TotalAnnotation Description
PFAMs
7,97112,85020,821
117 transmembrane receptor (rhodopsin family)
227 transmembrane sweet-taste receptor of 3 GCPR
6668134ATPase family associated with various cellular activities (AAA)
11680196ABC transporter
448ATP synthase alpha/beta family, nucleotide-binding domain
516EGF-like domain
192241Elongation factor Tu GTP binding domain
33Helix-loop-helix DNA-binding domain
81523Hsp70 protein
131326KH domain
16420SH3 domain
33TNFR/NGFR cysteine-rich region
141125Actin
18552237Ankyrin repeat
22PAN domain
91120ADP-ribosylation factor family
639Eukaryotic aspartyl protease
8647133Cyclic nucleotide-binding domain
11Cystatin domain
22Cytochrome b/b6/petB
516Cytochrome c
123Double-stranded RNA binding motif
2214225EF hand
114Fe-4S binding domain
11819Fibronectin type III domain
134Globin
10818Glutathione S-transferase, C-terminal domain
235Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
22Kazal-type serine protease inhibitor domain
44Kringle domain
11Laminin B (Domain IV)
44Laminin EGF domain
112lactate/malate dehydrogenase, NAD binding domain
11Low-density lipoprotein receptor repeat class B
5510Lectin C-type domain
22Ligand-gated ion channel
311748Myosin head (motor domain)
33LNR domain
5510Cytochrome P450
261204465Protein kinase domain
191837Pyridine nucleotide-disulphide oxidoreductase
343165Ras family
84553Response regulator receiver domain
11RNase H
67112179RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11Reverse transcriptase (RNA-dependent DNA polymerase)
325Copper/zinc superoxide dismutase (SODC)
224Iron/manganese superoxide dismutases, alpha-hairpin domain
141933Subtilase family
222042Sugar (and other) transporter
334578Thioredoxin
11Trefoil (P-type) domain
8210Trypsin
15823Tubulin/FtsZ family, GTPase domain
11von Willebrand factor type A domain
12214Zinc finger, C2H2 type
511061Zinc finger, C3HC4 type (RING finger)
81523Zinc knuckle
5059109short chain dehydrogenase
201535Zinc-binding dehydrogenase
437Thiolase, N-terminal domain
481765Beta-ketoacyl synthase, N-terminal domain
819272Fe-2S iron-sulfur cluster binding domain
291443Papain family cysteine protease
448Enolase, C-terminal TIM barrel domain
8917Glutamine amidotransferase class-I
131124TCP-1/cpn60 chaperonin family
538Glutamine synthetase, catalytic domain
6410Triosephosphate isomerase
192140E1-E2 ATPase
47451Core histone H2A/H2B/H3/H4
123Phorbol esters/diacylglycerol binding domain (C1 domain)
91019Bacterial transferase hexapeptide (six repeats)
7613tRNA synthetases class I (I, L, M and V)
121325Cyclin, N-terminal domain
44Carboxylesterase family
347DNA polymerase family B
224ATP synthase subunit C
22Legume lectin domain
2810Peroxidase
549Beta-lactamase
314C-5 cytosine-specific DNA methylase
383472Calcineurin-like phosphoesterase
257Cellulase (glycosyl hydrolase family 5)
5611tRNA synthetases class II (D, K and N)
5665121Mitochondrial carrier protein
192039Aminotransferase class I and II
8614Phosphoribosyl transferase domain
434285Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
235Phosphoglycerate kinase
123Ribosomal protein S4/S9 N-terminal domain
134Ribosomal protein S12/S23
459Chaperonin 10 Kd subunit
344680C2 domain
302656PH domain
88bZIP transcription factor
181129Aldehyde dehydrogenase family
262349Cytochrome b5-like Heme/Steroid binding domain
415Oxidoreductase molybdopterin binding domain
171633Oxidoreductase NAD-binding domain
293968SNF2 family N-terminal domain
112Ribosomal protein S7p/S5e
232447Ubiquitin-conjugating enzyme
123Isocitrate/isopropylmalate dehydrogenase
112Ribosomal Proteins L2, RNA binding domain
549Hsp90 protein
224Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
213Dihydrofolate reductase
112Ribosomal protein S3, C-terminal domain
11Cupin
314Annexin
112Eukaryotic-type carbonic anhydrase
112Chalcone and stilbene synthases, N-terminal domain
4592-oxoacid dehydrogenases acyltransferase (catalytic domain)
112Disintegrin
11UDP-glucoronosyl and UDP-glucosyl transferase
10818Aminotransferase class-III
123Ribosomal protein S19
224DNA gyrase B
527Lyase
123Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
112Sodium:neurotransmitter symporter family
33Adenylate and Guanylate cyclase catalytic domain
112ATP synthase delta (OSCP) subunit
112Orotidine 5'-phosphate decarboxylase / HUMPS family
123ATP:guanido phosphotransferase, C-terminal catalytic domain
224Indole-3-glycerol phosphate synthase
11Aromatic amino acid lyase
6612Pyruvate kinase, barrel domain
6260122Kinesin motor domain
104102206DnaJ domain
212546Proteasome subunit
4610Major intrinsic protein
224ATP synthase
112Glycosyl hydrolase family 1
106163'5'-cyclic nucleotide phosphodiesterase
123Ribosomal protein L22p/L17e
112Ribosomal protein L14p/L23e
252853Ubiquitin family
55Cofilin/tropomyosin-type actin-binding protein
23514-3-3 protein
6713Zinc carboxypeptidase
483179Aldo/keto reductase family
471966Myb-like DNA-binding domain
314Glycosyl hydrolases family 32 N-terminal domain
11Ribosomal protein L16p/L10e
22Ribosomal protein S14p/S29e
534093FKBP-type peptidyl-prolyl cis-trans isomerase
5510Glutathione peroxidase
33
549Flavodoxin
235Calreticulin family
268Common central domain of tyrosinase
61319Aminotransferase class-V
325Ribonucleotide reductase, small chain
7391164DEAD/DEAH box helicase
110135245Helicase conserved C-terminal domain
314Fructose-bisphosphate aldolase class-I
112EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
123Ribosomal protein L23
347Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11Potato inhibitor I family
213Ribosomal protein L5
224Pyridoxal-dependent decarboxylase conserved domain
246Citrate synthase, C-terminal domain
7714GHMP kinases N terminal domain
9817Biotin carboxylase, N-terminal domain
11Tryptophan synthase alpha chain
151429Pyridoxal-phosphate dependent enzyme
161935NUDIX domain
7815pfkB family carbohydrate kinase
41014Glycosyl hydrolases family 28
224Ribosomal protein L3
325Ribosomal protein L11, RNA binding domain
324577Histidine phosphatase superfamily (branch 1)
112Rubredoxin
123Thymidylate synthase
33Lipoxygenase
448ATP synthase alpha/beta chain, C terminal domain
10919Calponin homology (CH) domain
437Glutamine amidotransferases class-II
112Phosphoenolpyruvate carboxylase
437Ribosomal protein S15
91423'Cold-shock' DNA-binding domain
336Fructose-1-6-bisphosphatase, N-terminal domain
527Ribonucleotide reductase, all-alpha domain
213Ribosomal protein S2
224Amino acid permease
5510Prolyl oligopeptidase family
112Ribosomal protein L30p/L7e
2911Histidine phosphatase superfamily (branch 2)
224Aconitase family (aconitate hydratase)
11Glycosyl hydrolases family 17
224Ribosomal protein S5, N-terminal domain
538Nucleoside diphosphate kinase
123Ribosomal protein S10p/S20e
11Arrestin (or S-antigen), N-terminal domain
336Phosphoglucose isomerase
112SecY translocase
213Ribosomal protein L6
7613Polyprenyl synthetase
101121Dynamin family
112Transcription factor TFIID (or TATA-binding protein, TBP)
1111RTX calcium-binding nonapeptide repeat (4 copies)
14822Rieske [2Fe-2S] domain
131629Biotin-requiring enzyme
437Phosphofructokinase
224Ribosomal protein S17
112Hydroxymethylglutaryl-coenzyme A reductase
437FGGY family of carbohydrate kinases, N-terminal domain
123FERM central domain
17825Enoyl-CoA hydratase/isomerase
224Ribosomal protein S9/S16
112Transcription factor TFIIB repeat
5712Cytidine and deoxycytidylate deaminase zinc-binding region
55Chromo (CHRromatin Organisation MOdifier) domain
11C1q domain
213Phosphatidylinositol-specific phospholipase C, Y domain
415Phosphatidylinositol-specific phospholipase C, X domain
268D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
415Malic enzyme, N-terminal domain
22PEP-utilising enzyme, mobile domain
1126-phosphogluconate dehydrogenase, C-terminal domain
4564109WW domain
336Ribosomal RNA adenine dimethylase
172234406WD domain, G-beta repeat
5510Heavy-metal-associated domain
8513Adenylate kinase
325Phosphoglucomutase/phosphomannomutase, C-terminal domain
112Ribosomal protein S8
112Ribosomal protein S11
336LIM domain
11Matrixin
243054Regulator of chromosome condensation (RCC1) repeat
112Ribosomal protein S13/S18
235chorismate binding enzyme
42660s Acidic ribosomal protein
11CUB domain
437Prenyltransferase and squalene oxidase repeat
718Protein kinase C terminal domain
11Type II/IV secretion system protein
527S-adenosylmethionine synthetase, N-terminal domain
132033Bromodomain
11718Acyl-CoA dehydrogenase, C-terminal domain
211839Ubiquitin carboxyl-terminal hydrolase
112Ribosomal protein L36
11Ribonuclease T2 family
121224HSF-type DNA-binding
448SRP54-type protein, GTPase domain
213Urease alpha-subunit, N-terminal domain
12719Serine carboxypeptidase
112Ribosomal protein L20
171532Phosphatidylinositol 3- and 4-kinase
112Transketolase, thiamine diphosphate binding domain
33WHEP-TRS domain
6915Inositol monophosphatase family
31316Glutaredoxin
112Isocitrate lyase family
336Serine hydroxymethyltransferase
11Iron-containing alcohol dehydrogenase
448Ribosomal protein L10
6410KOW motif
11Ribosomal protein L34
112Ribosomal protein L33
369RF-1 domain
66Sodium:solute symporter family
112Imidazoleglycerol-phosphate dehydratase
134DNA polymerase family A
213IMP dehydrogenase / GMP reductase domain
213Glucose-6-phosphate dehydrogenase, NAD binding domain
112ROK family
313061Protein phosphatase 2C
325Nucleotidyl transferase
77Carbonic anhydrase
134Phosphoribulokinase / Uridine kinase family
101727Fatty acid desaturase
5712MutS domain V
11Delta-aminolevulinic acid dehydratase
112Arginase family
11819MCM P-loop domain
336Squalene/phytoene synthase
11Bacterial extracellular solute-binding proteins, family 5 Middle
22Bacterial extracellular solute-binding proteins, family 3
71926FHA domain
343064AMP-binding enzyme
437G-protein alpha subunit
6164125Chlorophyll A-B binding protein
12921HMG (high mobility group) box
336His Kinase A (phospho-acceptor) domain
43851Armadillo/beta-catenin-like repeat
9435129Tetratricopeptide repeat
593089Ion transport protein
224DNA gyrase/topoisomerase IV, subunit A
415Scavenger receptor cysteine-rich domain
55BRCA1 C Terminus (BRCT) domain
101828Glycosyl transferases group 1
15924Glycosyl transferase family 2
5813SAM domain (Sterile alpha motif)
22linker histone H1 and H5 family
628Ribosomal protein L7/L12 C-terminal domain
112Pectate lyase
213Urease, gamma subunit
437CoA-ligase
111324Phosphopantetheine attachment site
5510Formyl transferase
9918Metallopeptidase family M24
9020110Leucine Rich Repeat
11213alpha/beta hydrolase fold
538RNA polymerase Rpb2, domain 6
112PB1 domain
224Staphylococcal nuclease homologue
51722Rab-GTPase-TBC domain
123Tudor domain
268Zinc finger, ZZ type
246HRDC domain
122133CBS domain
224Ribosomal protein L13
336Ribosomal protein L4/L1 family
6612Clp protease
111223S1 RNA binding domain
112HIUase/Transthyretin family
3710AhpC/TSA family
549tRNA synthetases class I (W and Y)
279UvrD/REP helicase N-terminal domain
61420Rhodanese-like domain
33Universal stress protein family
243155Acetyltransferase (GNAT) family
134SecE/Sec61-gamma subunits of protein translocation complex
213C-terminal regulatory domain of Threonine dehydratase
235AIR synthase related protein, N-terminal domain
12921tRNA synthetase class II core domain (G, H, P, S and T)
81422SpoU rRNA Methylase family
426Tetrapyrrole (Corrin/Porphyrin) Methylases
112Glycosyl transferase family, a/b domain
19625PDZ domain
314Class II Aldolase and Adducin N-terminal domain
112Diacylglycerol kinase accessory domain
33Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
11Fes/CIP4, and EFC/F-BAR homology domain
50959IQ calmodulin-binding motif
145Phosphoinositide 3-kinase family, accessory domain (PIK domain)
415Phospholipase D Active site motif
21517Regulator of G protein signaling domain
268RhoGAP domain
3710RhoGEF domain
41014SPRY domain
336RNA polymerase Rpb1, domain 2
112Guanylate kinase
336Gelsolin repeat
111021UBA/TS-N domain
141125PHD-finger
213MAM domain, meprin/A5/mu
347Filamin/ABP280 repeat
141630HECT-domain (ubiquitin-transferase)
314Helix-hairpin-helix motif
11BRCA2 repeat
123MSP (Major sperm protein) domain
11Ribonuclease III domain
123Region in Clathrin and VPS
134RanBP1 domain
4610PPIC-type PPIASE domain
2911Zn-finger in Ran binding protein and others
161733Zinc finger C-x8-C-x5-C-x3-H type (and similar)
11B-box zinc finger
66Poly(ADP-ribose) polymerase catalytic domain
1818Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
15217F-box domain
213Elongation factor 1 gamma, conserved domain
41519Calpain family cysteine protease
112536CRAL/TRIO domain
4812BTB/POZ domain
325Ricin-type beta-trefoil lectin domain
5712Voltage gated chloride channel
112Caspase domain
1111GDSL-like Lipase/Acylhydrolase
22Poly-adenylate binding protein, unique domain
252348ABC transporter transmembrane region
11Integrase core domain
134FAD binding domain
134Condensation domain
112S-adenosyl-L-homocysteine hydrolase, NAD binding domain
213ribosomal L5P family C-terminus
111223Insulinase (Peptidase family M16)
448Dehydrogenase E1 component
112Lumazine binding domain
6814Elongation factor G C-terminus
6511HMGL-like
527DnaJ central domain
191837Sulfotransferase domain
44Ribosomal protein L1p/L10e family
8614Cation transporting ATPase, C-terminus
12921Cation transporter/ATPase, N-terminus
369OmpA family
112dUTPase
11Thymidine kinase from herpesvirus
112Aconitase C-terminal domain
8614Amino acid kinase family
11N-(5'phosphoribosyl)anthranilate (PRA) isomerase
448Acyl transferase domain
213Urease beta subunit
538Dihydrodipicolinate synthetase family
361854haloacid dehalogenase-like hydrolase
314Glycosyl hydrolases family 2
426Glycosyl hydrolases family 18
112Proliferating cell nuclear antigen, N-terminal domain
11Translation initiation factor IF-3, C-terminal domain
11Acylphosphatase
112Adenylosuccinate synthetase
123Asparaginase, N-terminal
549Peptidase S24-like
8311Inorganic pyrophosphatase
6410Glycosyl hydrolases family 16
224NADH:flavin oxidoreductase / NADH oxidase family
4373-hydroxyacyl-CoA dehydrogenase, C-terminal domain
7310Glycosyl hydrolase family 20, catalytic domain
6612HhH-GPD superfamily base excision DNA repair protein
112AIR carboxylase
459GMC oxidoreductase
257Asparagine synthase
11Septin
325EF-1 guanine nucleotide exchange domain
325Homoserine dehydrogenase
224Flavin-binding monooxygenase-like
112Glutamyl-tRNAGlu reductase, dimerisation domain
6511tRNA synthetases class I (E and Q), catalytic domain
224tRNA synthetases class I (R)
6814XPG N-terminal domain
9716Metallo-beta-lactamase superfamily
22F5/8 type C domain
314Putative esterase
213Ferrochelatase
347Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
112Arginosuccinate synthase
112Electron transfer flavoprotein FAD-binding domain
167RNB domain
112Dioxygenase
11Glycosyltransferase family 29 (sialyltransferase)
11CNH domain
235Diacylglycerol kinase catalytic domain
82331Dual specificity phosphatase, catalytic domain
246MyTH4 domain
33
22P21-Rho-binding domain
102131PX domain
11Ras association (RalGDS/AF-6) domain
3710UBX domain
224VHS domain
11Phosphoinositide 3-kinase C2
10717Carbon-nitrogen hydrolase
235N-acetyltransferase
123Prephenate dehydratase
33Syntaxin
257Pentapeptide repeats (8 copies)
112Pumilio-family RNA binding repeat
6814Histone-like transcription factor (CBF/NF-Y) and archaeal histone
224Pterin binding enzyme
224ER lumen protein retaining receptor
134Glycoprotease family
112Histidinol dehydrogenase
44impB/mucB/samB family
11
112Ribosomal L15
145Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11Ribosomal prokaryotic L21 protein
123Ribosomal L28 family
224Ribosomal L29 protein
123Ribosomal L39 protein
112Ribosomal S17
527Ribulose-phosphate 3 epimerase family
11Iodothyronine deiodinase
11Translationally controlled tumour protein
66Glycosyl hydrolase family 7
61016AP2 domain
123042RNA pseudouridylate synthase
61218Histone deacetylase domain
44Glycosyltransferase family 10 (fucosyltransferase) C-term
22POT family
33PWWP domain
144054SET domain
5914Isochorismatase family
213Permease family
224Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
41014XPG I-region
257DNA photolyase
325Nitroreductase family
8412Cytosol aminopeptidase family, catalytic domain
412970Sulfatase
1126,7-dimethyl-8-ribityllumazine synthase
112Ribosomal protein S16
145Acyl CoA binding protein
5510Cullin family
224Elongation factor TS
112FAD binding domain
72532EamA-like transporter family
11Small Multidrug Resistance protein
131225ThiF family
112Ribosomal family S4e
538Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
9514Ammonium Transporter Family
4711Sulfate permease family
11MATH domain
347Uncharacterized protein family UPF0004
224Dehydratase family
224Transaldolase/Fructose-6-phosphate aldolase
246Mechanosensitive ion channel
123GTP cyclohydrolase II
1123,4-dihydroxy-2-butanone 4-phosphate synthase
5510Adaptor complexes medium subunit family
61117Exonuclease
11Dipeptidyl peptidase IV (DPP IV) N-terminal region
112NB-ARC domain
44Lamin Tail Domain
8513Glycosyl hydrolase family 3 N terminal domain
112Ribosomal protein L44
11Sodium:sulfate symporter transmembrane region
112DNA-dependent RNA polymerase
224FAD binding domain in molybdopterin dehydrogenase
112Glycosyl transferase family 4
325HCO3- transporter family
123Nucleosome assembly protein (NAP)
9817Synaptobrevin
112GMP synthase C terminal domain
224Adenosine/AMP deaminase
7916Oxidoreductase FAD-binding domain
358Thioesterase domain
224Histidine biosynthesis protein
5611Glycosyltransferase family 20
112UDP-glucose/GDP-mannose dehydrogenase family, central domain
112DNA gyrase B subunit, carboxyl terminus
224Carbamoyl-phosphate synthase small chain, CPSase domain
224PAS fold
11
123Probable molybdopterin binding domain
246Sec1 family
123GDP dissociation inhibitor
31215Sodium/hydrogen exchanger family
123RNA polymerase Rpb3/RpoA insert domain
123Inward rectifier potassium channel transmembrane domain
246Initiation factor 2 subunit family
22PQQ enzyme repeat
123Electron transfer flavoprotein domain
11Uricase
112Ribosomal S3Ae family
112Ribosomal L27 protein
325GTP1/OBG
112Gamma-glutamyltranspeptidase
11Ribosomal L40e family
145GrpE
156TatD related DNase
123Inhibitor of apoptosis-promoting Bax1
213Eukaryotic DNA topoisomerase I, catalytic core
11NusB family
4610Dynamin central region
1126-O-methylguanine DNA methyltransferase, DNA binding domain
11Bacteriorhodopsin-like protein
6511Carboxyl transferase domain
6713UbiA prenyltransferase family
314DegT/DnrJ/EryC1/StrS aminotransferase family
459Endoribonuclease L-PSP
224SecA preprotein cross-linking domain
123Phosphorylase superfamily
549Cys/Met metabolism PLP-dependent enzyme
123Glycosyl hydrolases family 31
112NADH ubiquinone oxidoreductase, 20 Kd subunit
2121ABC-2 type transporter
11415Bestrophin, RFP-TM, chloride channel
358Amino-transferase class IV
246CDP-alcohol phosphatidyltransferase
44Calpain large subunit, domain III
235ATP dependent DNA ligase domain
617FMN-dependent dehydrogenase
112Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
1233-beta hydroxysteroid dehydrogenase/isomerase family
112Glycosyl hydrolases family 38 N-terminal domain
325Nitrite and sulphite reductase 4Fe-4S domain
123Magnesium chelatase, subunit ChlI
112Hint module
112KDPG and KHG aldolase
112Ribosomal protein S18
22Clathrin light chain
224Ubiquitin carboxyl-terminal hydrolase, family 1
22
123Ribosomal protein S19e
112Ribosomal protein S6e
44Receptor family ligand binding region
347Transcription factor S-II (TFIIS)
112Surface antigen
246emp24/gp25L/p24 family/GOLD
347NifU-like domain
112Cyclin-dependent kinase regulatory subunit
11Asparaginase
11Dihydrodipicolinate reductase, N-terminus
112F-actin capping protein, beta subunit
224Fructose-bisphosphate aldolase class-II
235Semialdehyde dehydrogenase, NAD binding domain
325DNA mismatch repair protein, C-terminal domain
235Dephospho-CoA kinase
224MAPEG family
112G10 protein
224Heme oxygenase
11Succinate dehydrogenase/Fumarate reductase transmembrane subunit
1122-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
44CD36 family
213DNA topoisomerase
112Elongation factor P (EF-P) OB domain
123Glucose inhibited division protein A
347Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
123Peptidase family U32
123RNA 3'-terminal phosphate cyclase
1783' exoribonuclease family, domain 1
224tRNA-splicing ligase RtcB
22tRNA pseudouridine synthase D (TruD)
81119SPFH domain / Band 7 family
246Cytidylyltransferase family
224Formamidopyrimidine-DNA glycosylase N-terminal domain
246GDA1/CD39 (nucleoside phosphatase) family
5712GNS1/SUR4 family
415Hydroxymethylglutaryl-coenzyme A synthase N terminal
134Inosine-uridine preferring nucleoside hydrolase
213Ribosomal protein L21e
112Ribosomal protein L36e
112Ribosomal protein L6e
11Phosphatidylethanolamine-binding protein
246RIO1 family
11Ribosomal protein S21
21012Tub family
224Alanine racemase, N-terminal domain
123Uncharacterized protein family UPF0016
246Putative RNA methylase family UPF0020
246PP-loop family
112Shwachman-Bodian-Diamond syndrome (SBDS) protein
112SNO glutamine amidotransferase family
11Urocanase Rossmann-like domain
134Translation initiation factor 1A / IF-1
22Copper amine oxidase, enzyme domain
112Dihydroorotate dehydrogenase
246Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
11Macrophage migration inhibitory factor (MIF)
415
281016S rRNA methyltransferase RsmB/F
112RNA polymerase Rpb5, C-terminal domain
112RNA polymerase Rpb6
426RNA polymerase Rpb3/Rpb11 dimerisation domain
112RNA polymerases N / 8 kDa subunit
11Peptidyl-tRNA hydrolase
224Ribosomal protein L17
112Ribosomal protein L31e
112Ribosomal protein L34e
112Ribosomal protein S28e
224Ribosomal protein S8e
134Shikimate kinase
112Trehalase
235Uncharacterized protein family UPF0029
71623Dihydrouridine synthase (Dus)
336Uroporphyrinogen decarboxylase (URO-D)
235ubiE/COQ5 methyltransferase family
134NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
11Beta-eliminating lyase
112Adenylate cyclase associated (CAP) N terminal
235Casein kinase II regulatory subunit
11Cytochrome c oxidase subunit Vb
8715Clathrin adaptor complex small chain
426Coproporphyrinogen III oxidase
5914Dynein light chain type 1
325Ergosterol biosynthesis ERG4/ERG24 family
11DNA/RNA non-specific endonuclease
213Formate/nitrite transporter
112GTP cyclohydrolase I
11Glycosyl hydrolases family 39
437HIT domain
22Indoleamine 2,3-dioxygenase
11Mannitol dehydrogenase Rossmann domain
112Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain
213Phosphomannose isomerase type I
235Protein prenyltransferase alpha subunit repeat
336-pyruvoyl tetrahydropterin synthase
123Pyridoxamine 5'-phosphate oxidase
112Membrane dipeptidase (Peptidase family M19)
123Ribosomal protein L19
224Ribosomal protein L24e
213Ribosomal protein L35Ae
6713Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
112Ribosomal protein S21e
11Ribosomal protein S6
112Ribosomal protein S7e
235Translation initiation factor SUI1
213Putative undecaprenyl diphosphate synthase
112Carbohydrate kinase
123Thioredoxin-like [2Fe-2S] ferredoxin
112SAICAR synthetase
33Xylose isomerase-like TIM barrel
325Alanine dehydrogenase/PNT, C-terminal domain
459Aldose 1-epimerase
112Chorismate synthase
11Cytochrome c/c1 heme lyase
61016FAD dependent oxidoreductase
213F-actin capping protein alpha subunit
11Formate--tetrahydrofolate ligase
112Fibrillarin
22Malate synthase
112Ribosomal protein L19e
123Ribosomal protein L9, N-terminal domain
112Ribosomal protein S24e
213Ribosomal protein S26e
11Membrane-associating domain
112Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold
1127,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
112Phosphoenolpyruvate carboxykinase
112Ribosomal protein L13e
213Telomere recombination
213Glycosyl hydrolases family 35
7815CAP-Gly domain
22
224Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
22Creatinase/Prolidase N-terminal domain
325DSBA-like thioredoxin domain
22Pyruvate phosphate dikinase, PEP/pyruvate binding domain
325Polypeptide deformylase
123Pterin 4 alpha carbinolamine dehydratase
134mRNA capping enzyme, catalytic domain
7815OB-fold nucleic acid binding domain
145Glycosyl hydrolases family 6
347Peptidase family S49
191029Kelch motif
22Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
235Ribonuclease HII
1010
81422FYVE zinc finger
115'-3' exonuclease, C-terminal SAM fold
33DHH family
336Sec7 domain
71623NAD dependent epimerase/dehydratase family
213Porphobilinogen deaminase, dipyromethane cofactor binding domain
112SIS domain
112Helix-turn-helix
4711Phosphate transporter family
11Ribosomal L25p family
55Collagen triple helix repeat (20 copies)
11Clathrin propeller repeat
9615JAB1/Mov34/MPN/PAD-1 ubiquitin protease
101424PCI domain
224tRNA synthetases class I (C) catalytic domain
131326Oxidoreductase family, NAD-binding Rossmann fold
123tRNA synthetases class II core domain (F)
257tRNA synthetases class II (A)
111324Putative GTPase activating protein for Arf
549tRNA pseudouridine synthase
235ENTH domain
112Reprolysin (M12B) family zinc metalloprotease
182038LSM domain
358R3H domain
459Amidase
11BAH domain
224Methyl-CpG binding domain
112Hsp33 protein
448Peptidase family M3
336Peptidase family M1 domain
7815Peptidase family M41
347Peptidase family M48
325NHL repeat
112Acetohydroxy acid isomeroreductase, catalytic domain
123Low molecular weight phosphotyrosine protein phosphatase
11MAGE family
112Uncharacterized protein family (UPF0051)
112Eukaryotic porin
22GRIP domain
112Skp1 family, dimerisation domain
246Cytidylyltransferase-like
11Pentapeptide repeats (8 copies)
11Pyroglutamyl peptidase
22Putative peptidoglycan binding domain
235PUA domain
112Class-II DAHP synthetase family
33LysM domain
7714S4 domain
123PWI domain
44Proprotein convertase P-domain
7512IBR domain, a half RING-finger domain
134Shikimate / quinate 5-dehydrogenase
161733Transmembrane amino acid transporter protein
213Frataxin-like domain
224GXGXG motif
1212FAD binding domain
22
112V-type ATPase 116kDa subunit family
11Periplasmic binding protein
52126Glycosyl transferase family 8
112Phosphoribosyl-AMP cyclohydrolase
112Phosphoribosyl-ATP pyrophosphohydrolase
358Phosphatidylinositol-4-phosphate 5-Kinase
145Phosphoadenosine phosphosulfate reductase family
325TruB family pseudouridylate synthase (N terminal domain)
112Respiratory-chain NADH dehydrogenase 51 Kd subunit
123ATP-NAD kinase
336Iron-sulphur cluster biosynthesis
213Polysaccharide deacetylase
161834DHHC palmitoyltransferase
11Glycosyl transferase family 11
5611Glycosyl hydrolase family 47
5611PPR repeat
112Adenosylmethionine decarboxylase
11GIY-YIG catalytic domain
224CorA-like Mg2+ transporter protein
41115Cation efflux family
6511Peptidase family M20/M25/M40
246ShK domain-like
134Peptidase family M23
81523Acyltransferase
3912MatE
10717DnaJ C terminal domain
437Fumarylacetoacetate (FAA) hydrolase family
11Reprolysin family propeptide
549Spermine/spermidine synthase domain
6511FAD binding domain
325Natural resistance-associated macrophage protein
3710PAP2 superfamily
527Aminomethyltransferase folate-binding domain
123MaoC like domain
426Adenylylsulphate kinase
3811G-patch domain
5611Putative tRNA binding domain
224GAF domain
3366-phosphofructo-2-kinase
123NifU-like N terminal domain
81321Flavin containing amine oxidoreductase
22AI-2E family transporter
6511Cyclin M transmembrane N-terminal domain
358O-methyltransferase
22Glycine cleavage H-protein
11
112Ribosomal protein S27a
9918Adaptin N terminal region
224Protein phosphatase 2A regulatory B subunit (B56 family)
614203'-5' exonuclease
22Flavin reductase like domain
224Proline dehydrogenase
134MutS domain I
111021Peptide methionine sulfoxide reductase
22Hpt domain
112ATP phosphoribosyltransferase
1111Phosphotransferase enzyme family
11718SelR domain
112Methylmalonyl-CoA mutase
235Conserved region in glutamate synthase
2244'-phosphopantetheinyl transferase superfamily
112Ribosomal protein S20
213Peptidase C13 family
325Eukaryotic initiation factor 4E
22NAD-dependent DNA ligase adenylation domain
112Ribosomal protein L32
11Myo-inositol-1-phosphate synthase
145Macro domain
134Ribosomal protein S27
112SmpB protein
112Diaminopimelate epimerase
22SOR/SNZ family
224Riboflavin kinase
91019Rhomboid family
33Glycosyltransferase family 92
201838Sodium/calcium exchanger protein
112Queuine tRNA-ribosyltransferase
358UTP--glucose-1-phosphate uridylyltransferase
224Transcriptional regulator
437Smr domain
112IPP transferase
112Manganese-stabilising protein / photosystem II polypeptide
268BolA-like protein
235Ham1 family
6511FtsJ-like methyltransferase
112Quinolinate phosphoribosyl transferase, C-terminal domain
112UreF
112Nucleoside transporter
61319Patatin-like phospholipase
145Dienelactone hydrolase family
123CheR methyltransferase, SAM binding domain
336STAS domain
123Poly A polymerase head domain
11GLTT repeat (6 copies)
22tRNA (Guanine-1)-methyltransferase
224ATP-sulfurylase
112Importin beta binding domain
336Toprim domain
5467121MYND finger
7815Glycosyltransferase family 25 (LPS biosynthesis protein)
12315Acyltransferase family
639Sodium Bile acid symporter family
4483-dehydroquinate synthase
66Galactosyltransferase
71421Lipase (class 3)
123Ribosome recycling factor
33Divalent cation transporter
112UreD urease accessory protein
112Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
112Ribosomal L22e protein family
112Ribosomal L27e protein family
123Ribosomal L28e protein family
213Ribosomal L29e protein family
112Ribosomal L37ae protein family
112Ribosomal L38e protein family
11RimM N-terminal domain
123Ribosomal L32p protein family
134Alternative oxidase
77PsbP
44Glycolipid 2-alpha-mannosyltransferase
156Ferric reductase like transmembrane component
336MraW methylase family
336snoRNA binding domain, fibrillarin
224[2Fe-2S] binding domain
33Surp module
112CHC2 zinc finger
112AICARFT/IMPCHase bienzyme
112Putative membrane protein insertion efficiency factor
2135-formyltetrahydrofolate cyclo-ligase family
112ATP synthase subunit D
33Hemerythrin HHE cation binding domain
11Chorismate mutase type II
11D-ala D-ala ligase N-terminus
11WSC domain
11MAC/Perforin domain
134GPCR proteolysis site, GPS, motif
11Trypsin Inhibitor like cysteine rich domain
246IPT/TIG domain
12517FG-GAP repeat
145Transglutaminase-like superfamily
549ACT domain
437HNH endonuclease
11FF domain
325NAC domain
11PIN domain
516Proteasome/cyclosome repeat
22START domain
224MOZ/SAS family
123Putative diphthamide synthesis protein
112Domain of unknown function UPF0086
134RibD C-terminal domain
224Domain found in IF2B/IF5
11RNase P subunit p30
22Desulfoferrodoxin
123Iron-sulfur cluster assembly protein
22Uncharacterised protein family UPF0047
112DNA primase small subunit
11Rpp14/Pop5 family
123Diphthamide synthase
112CbiX
11Protein of unknown function DUF72
112Ribosomal protein L37e
134Nucleotidyltransferase domain
112eIF-6 family
549Glycosyl hydrolase family 3 C-terminal domain
11Deoxyhypusine synthase
246Prefoldin subunit
213SRP19 protein
112Cobalamin adenosyltransferase
99Sulfite exporter TauE/SafE
6323850S ribosome-binding GTPase
22Mut7-C RNAse domain
11CYTH domain
112Ribosomal protein L14
224Protein of unknown function DUF84
55NYN domain
112Protein of unknown function DUF89
336TRAM domain
213Integral membrane protein DUF92
11Thi4 family
112Archease protein family (MTH1598/TM1083)
11Integral membrane protein EMC3/TMCO1-like
11Domain of unknown function DUF108
11ArgJ family
213TraB family
336DJ-1/PfpI family
617HD domain
112MoaC family
11Hydantoinase/oxoprolinase
123tRNA intron endonuclease, catalytic C-terminal domain
9312Amidohydrolase family
325tRNA-methyltransferase O
235Peptidyl-tRNA hydrolase PTH2
213Double-stranded DNA-binding domain
22CRS1 / YhbY (CRM) domain
347Mitochondrial biogenesis AIM24
268VIT family
112Aconitase X swivel domain
123ATP synthase (F/14-kDa) subunit
112ATP synthase (E/31 kDa) subunit
112ATP synthase (C/AC39) subunit
11Translin family
213N2,N2-dimethylguanosine tRNA methyltransferase
246CXXC zinc finger domain
121325REJ domain
1010BNR/Asp-box repeat
314Glycosyl hydrolase family 45
134eIF4-gamma/eIF5/eIF2-epsilon
123BCCT, betaine/carnitine/choline family transporter
112Ribosome-binding factor A
11SCP-2 sterol transfer family
83240SAP domain
11CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
112Glycosyl hydrolase family 30 TIM-barrel domain
437Melibiase
11Aromatic-di-Alanine (AdAR) repeat
112Carboxypeptidase Taq (M32) metallopeptidase
11SURF4 family
11D12 class N6 adenine-specific DNA methyltransferase
314Palmitoyl protein thioesterase
34760Kd inner membrane protein
11Josephin
11SURF1 family
134Phosducin
112RHO protein GDP dissociation inhibitor
213Aminopeptidase I zinc metalloprotease (M18)
11X-Pro dipeptidyl-peptidase (S15 family)
112Uncharacterized protein family UPF0054
459
41115TAZ zinc finger
112Nuclear transport factor 2 (NTF2) domain
235Adenosine-deaminase (editase) domain
459Beige/BEACH domain
3912DENN (AEX-3) domain
336MGS-like domain
11Repair protein Rad1/Rec1/Rad17
3811Sir2 family
448Zn-finger in ubiquitin-hydrolases and other protein
11RNA polymerases M/15 Kd subunit
11UvrB/uvrC motif
112Prephenate dehydrogenase
22XYPPX repeat (two copies)
22Peptidase family M50
112Cytochrome C1 family
145TRAF-type zinc finger
617AT hook motif
13619Formin Homology 2 Domain
11SAD/SRA domain
213HAT (Half-A-TPR) repeat
189ATP-dependent protease La (LON) substrate-binding domain
11PXA domain
11ParB-like nuclease domain
22Regulatory subunit of type II PKA R-subunit
22SWIB/MDM2 domain
2810Vacuolar sorting protein 9 (VPS9) domain
112WH2 motif
156Putative zinc finger in N-recognin (UBR box)
44Villin headpiece domain
11Nitrile hydratase beta subunit
33Dynamin GTPase effector domain
156GYF domain
42024BTB/POZ domain
123Methylenetetrahydrofolate reductase
213ATP-grasp domain
213Thymidylate kinase
31013PA domain
6713Phospholipase/Carboxylesterase
224NAD(P) transhydrogenase beta subunit
11Proteasome activator pa28 beta subunit
325TrkA-N domain
246FAT domain
437FATC domain
11Aspartate decarboxylase
5813Guanylate-binding protein, N-terminal domain
11Transcription initiation factor IIA, gamma subunit, helical domain
11Transcription initiation factor IID, 18kD subunit
112Ubiquinol-cytochrome C reductase complex 14kD subunit
224DHHA1 domain
11Amidinotransferase
11Phosphoribosyltransferase