PFAM Domains • Algae
Annotations/GenomesAplke1Araly1Astpho2Auran1Aurli1Auxeprot1Batpra1Bigna1Blahom1ChlNC64A_1Chlre4Chocri1Chrsp_1Chrzof1Coc_C169_1Crypto2293_1Cyamer1Dicre1Dunsal1Ectsil1Emihu1Fracy1Galsul1Giaint1Gonpec1Guith1MicpuC3v2MicpuN3v2Monneg1Naegr1Nangad1Nanoce1779_2Ochro2298_1Ost9901_3OstRCC809_2Ostta1115_2Ostta4221_3Oxytri1Partet1Pavlov2436_1Pelago2097_1Phaant1Phaglo1Phatr2Phyca11Phyci1Phyinf1Phypa1_1Phyra1_1Physo3Picsp_1Plafal1Poptr1_1Porumb1Psemu1Rapsub1Retfil1Sappar1SceoblEN4_1Schag1Selmo1Sobl393_1Sorbi1Symmic1SymretAf1SymretSc1SymretSp1SymretSw1Tetthe1Thaoce1Thaps3Toxgon1Trivag1Trybru1Volca1TotalAnnotation Description
PFAMs
8,9347,9527,9719,3346,9667,88712,4925,5816,6897,5656,92713,55112,0577,79714,0495,1139,75010,95813,33013,47210,4247,1943,57212,14813,7318,0298,40910,4018,8378,4288,97611,4085,4773,1168,2817,79615,85025,41611,73212,85020,20516,8955,54411,25111,98213,58416,7629,38512,4197,1984,56731,2487,0418,49311,19716,91016,04310,7828,34115,05513,70423,79128,16910,0489,9649,95710,06315,96613,6586,3045,82832,6476,1373,419835,007
123221133187 transmembrane receptor (rhodopsin family)
11124117187 transmembrane receptor (Secretin family)
1230112172294222444712429821697 transmembrane sweet-taste receptor of 3 GCPR
496066484450574348524966625044345661647367442661625857564448496846295551578550687265475252509349574734144575762796657457970878358585758437556384349374,233ATPase family associated with various cellular activities (AAA)
945711683464389296064486273558031765773132814622828652539081817767472348456311766801128649159142148112158169521620659548276138758313589130142747280731767950249622305,923ABC transporter
544636563465645455455824455637410531348246464354494574136866454659755557744352411ATP synthase alpha/beta family, nucleotide-binding domain
1355193931171042110163111225225541331122631192EGF-like domain
1621191617192922161723162520201920252426262182124212119282121232114232125452022221521181823381919222240212221292421152427312719191919312322211221101,610Elongation factor Tu GTP binding domain
536315428215551342522132136312113635565946616045316465150533425648Helix-loop-helix DNA-binding domain
2132221516365386527163413713344946731449224242343926254187332678611356311427Hsp20/alpha crystallin family
1112898915681188159103559122115108615221110112213122410481083423152319616201921172676317109561999168303399991520117991351,197Hsp70 protein
12121312121721141313412131133212132026159212323333101111161721142223912141335258997205101165561315858818133169131313135111393241,107KH domain
1212112211115Kunitz/Bovine pancreatic trypsin inhibitor domain
313613Methyl-accepting chemotaxis protein (MCP) signalling domain
211122121421111314141Ribulose bisphosphate carboxylase large chain, catalytic domain
114243321244235461153SH2 domain
301162629411512101112161114142113283211111022045514139267SH3 domain
32932011113145TNFR/NGFR cysteine-rich region
112u-PAR/Ly-6 domain
4061417671814457121267666142198471244886710166477173610111512715101116994111988961135131081829666615641132112926Actin
10053185176115352711110739046372991554140367931153994639111126120919515718710443325521099862193354375815327211221550772141133141525934584551415151213707469343287,482Ankyrin repeat
612392911212523131191313141111813112242219536273286572733333161428PAN domain
611914882297161011118126812141871571413101111339915757729432211262541312163113137824871220261112121422298888368883716111,026ADP-ribosylation factor family
32641121133412181531017589118221377442333744532624691211251313210684621513422678257991194956611817Eukaryotic aspartyl protease
3122865451136171837524123911616453216222897293216981027115151518351026479963958946815539652353202055921454122723116171816185624222713933,382Cyclic nucleotide-binding domain
21227Cadherin domain
113412214450Beta/Gamma crystallin
11211121111122121721159211311111112375Cystatin domain
131111112117115111414343Cytochrome b(C-terminal)/b6/petD
1111217123222Cytochrome b/b6/petB
1251122341112111111231132211211112311523211521121213112114143111133321145Cytochrome c
23111222122452172345121312114262413421053331213111323712122203Double-stranded RNA binding motif
624322115212751401012823361462316613284989369411935181292024211345100127612812112712125931671123944157241476661353,463EF hand
131311236611522141111433122142112111113211119142111271512111354Fe-4S binding domain
111115Intermediate filament protein
11222234219Fibronectin type II domain
721111211028413527131018424237151821111123816151122627510227411382251046225111116811463Fibronectin type III domain
111112271344117242211342145121612435112941111Globin
251210163524469551412738810111691112112119174412336634317814672128152013252158111239109143110719988925221121889Glutathione S-transferase, C-terminal domain
33243444432323233456722355531544333322335568981461121927415345571433332452642313Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
11Hemopexin
23313721132231122151171544530227172046134452763132171371111405Homeodomain
22Immunoglobulin domain
1167223323231235937173162021551322229362193Kazal-type serine protease inhibitor domain
41713111131132221511141453197Kringle domain
162111111116Laminin B (Domain IV)
143121271511431111111131259Laminin EGF domain
451256355532663745331315355432225545292122122314224319616536387128444441231644323lactate/malate dehydrogenase, NAD binding domain
31217Low-density lipoprotein receptor domain class A
1113Low-density lipoprotein receptor repeat class B
75351512117326613216551132213256191512204Lectin C-type domain
23117122133463112212523482166272214222232206Ligand-gated ion channel
21123110Lipocalin / cytosolic fatty-acid binding protein family
3933147322513329331023243891312229115732111121239173546428253482424361296203925044122222321314111122915Myosin head (motor domain)
1213631211211431212111120113112LNR domain
4722524111016203517949384532341313308381412125252121615106111012227512106333026702438632115213320454530196563314131303131501771262,363Cytochrome P450
2114Phospholipase A2
2461822613011068832913220042314135325715031055200246307425188782555844361221343044021311532301025097959332,50423220440634111335243236062637040098851,6451931732825635122222475622831,21569121220720320596919314113295516918825,691Protein kinase domain
2515192099187151611161816991511211724133182112147141620141181081416101822171719171524172210828121613111815191519272915151515122020913781,126Pyridine nucleotide-disulphide oxidoreductase
50183441912752812149311914291113145128181114302313151515218195112512131322602731443412343641603535914739161817852174223195467131313131132424193642472,932Ras family
61181549717122121081371415192221414131183233938413816821133452620124547155798220938122813454677787761931,426Response regulator receiver domain
1112222212421221311121241623121930242162125741111453RNase H
58926751595011451888538529784672278887610673638811228379945363647359264752105132601128110053696960178656660563182659118107638943147103240149777377776445597213055385,958RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
1231121213Retroviral aspartyl protease
31193382322736461112313719911723312236851448242511221,549Reverse transcriptase (RNA-dependent DNA polymerase)
2111611411211413121361517211412105Serpin (serine protease inhibitor)
234221232221331322313382125521117128711275443130Copper/zinc superoxide dismutase (SODC)
162241225421463335612245113423211114322222224223253252252353333331343742206Iron/manganese superoxide dismutases, alpha-hairpin domain
2111412115641910416191221117142217112111863817711112232115191115137813187811379171030333574260895481111111111571250221,133Subtilase family
212221412926219162182222852181834147027776288161521154121129372020363016665259367668729419259572824237954421192120531615551571,765Sugar (and other) transporter
1382111111114228Sushi repeat (SCR repeat)
22303318263940282826184535295610303249484719113960434434192726342516373639603945967721253333522325291760284042213937203547475733333333303428188514112,598Thioredoxin
22Thyroglobulin type-1 repeat
11Snake toxin and toxin-like protein