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PFAM Domains • Eustigmatophyta
Annotations/GenomesNangad1Nanoce1779_2TotalAnnotation Description
PFAMs
8,4288,97617,404
227 transmembrane sweet-taste receptor of 3 GCPR
484997ATPase family associated with various cellular activities (AAA)
8177158ABC transporter
7411ATP synthase alpha/beta family, nucleotide-binding domain
212142Elongation factor Tu GTP binding domain
639Helix-loop-helix DNA-binding domain
4610Hsp20/alpha crystallin family
131225Hsp70 protein
111627KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
325SH2 domain
11SH3 domain
71017Actin
91928Ankyrin repeat
9918ADP-ribosylation factor family
7714Eukaryotic aspartyl protease
81018Cyclic nucleotide-binding domain
213Cystatin domain
22Cytochrome b(C-terminal)/b6/petD
112Cytochrome b/b6/petB
11Cytochrome c
112EF hand
2134Fe-4S binding domain
516Fibronectin type III domain
224Globin
448Glutathione S-transferase, C-terminal domain
549Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
325Kazal-type serine protease inhibitor domain
224lactate/malate dehydrogenase, NAD binding domain
213Lectin C-type domain
5712Myosin head (motor domain)
11LNR domain
121628Cytochrome P450
131153284Protein kinase domain
162036Pyridine nucleotide-disulphide oxidoreductase
181937Ras family
336Response regulator receiver domain
6364127RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
112Reverse transcriptase (RNA-dependent DNA polymerase)
325Copper/zinc superoxide dismutase (SODC)
235Iron/manganese superoxide dismutases, alpha-hairpin domain
71118Subtilase family
161531Sugar (and other) transporter
272653Thioredoxin
336Trypsin
9918Tubulin/FtsZ family, GTPase domain
224Zinc finger, C2H2 type
7512Zinc finger, C3HC4 type (RING finger)
33Zinc knuckle
11Ribulose bisphosphate carboxylase, small chain
112Protein-tyrosine phosphatase
5356109short chain dehydrogenase
161228Zinc-binding dehydrogenase
347Thiolase, N-terminal domain
16925Beta-ketoacyl synthase, N-terminal domain
1413272Fe-2S iron-sulfur cluster binding domain
81018Papain family cysteine protease
224Enolase, C-terminal TIM barrel domain
22Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
7714Glutamine amidotransferase class-I
141428TCP-1/cpn60 chaperonin family
22ATP synthase A chain
224Glutamine synthetase, catalytic domain
336Triosephosphate isomerase
222648E1-E2 ATPase
22Photosynthetic reaction centre protein
111021Core histone H2A/H2B/H3/H4
325Phorbol esters/diacylglycerol binding domain (C1 domain)
41014Bacterial transferase hexapeptide (six repeats)
3710tRNA synthetases class I (I, L, M and V)
101727Cyclin, N-terminal domain
336Carboxylesterase family
459DNA polymerase family B
213ATP synthase subunit C
448Peroxidase
114Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
101020Beta-lactamase
11C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
22Nitrogenase component 1 type Oxidoreductase
262652Calcineurin-like phosphoesterase
91322Cellulase (glycosyl hydrolase family 5)
7613tRNA synthetases class II (D, K and N)
5453107Mitochondrial carrier protein
11recA bacterial DNA recombination protein
161935Aminotransferase class I and II
7815Phosphoribosyl transferase domain
232447Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
448Phosphoglycerate kinase
415Ribosomal protein S4/S9 N-terminal domain
213Ribosomal protein S12/S23
336Chaperonin 10 Kd subunit
121527C2 domain
121325PH domain
7512bZIP transcription factor
121224Aldehyde dehydrogenase family
211031Fungal Zn(2)-Cys(6) binuclear cluster domain
141529Cytochrome b5-like Heme/Steroid binding domain
224Oxidoreductase molybdopterin binding domain
8917Oxidoreductase NAD-binding domain
252651SNF2 family N-terminal domain
314Ribosomal protein S7p/S5e
181836Ubiquitin-conjugating enzyme
224Isocitrate/isopropylmalate dehydrogenase
213Ribosomal Proteins L2, RNA binding domain
448Hsp90 protein
426Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
224Dihydrofolate reductase
11Chitin recognition protein
11Cysteine-rich secretory protein family
314Ribosomal protein S3, C-terminal domain
314Eukaryotic-type carbonic anhydrase
112Bacterial regulatory proteins, luxR family
65112-oxoacid dehydrogenases acyltransferase (catalytic domain)
112Catalase
112UDP-glucoronosyl and UDP-glucosyl transferase
6713Aminotransferase class-III
314Ribosomal protein S19
224DNA gyrase B
325Thiamine pyrophosphate enzyme, central domain
437Lyase
224Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
112Ferritin-like domain
134Adenylate and Guanylate cyclase catalytic domain
112ATP synthase delta (OSCP) subunit
112Orotidine 5'-phosphate decarboxylase / HUMPS family
112Bacterial DNA-binding protein
112ATP:guanido phosphotransferase, C-terminal catalytic domain
448Indole-3-glycerol phosphate synthase
112Aromatic amino acid lyase
22Photosystem I psaA/psaB protein
459Pyruvate kinase, barrel domain
211839Kinesin motor domain
383573DnaJ domain
252752Proteasome subunit
4913Major intrinsic protein
235ATP synthase
358Glycosyl hydrolase family 1
325Ribosomal protein L22p/L17e
314Ribosomal protein L14p/L23e
212142Ubiquitin family
224Cofilin/tropomyosin-type actin-binding protein
11214-3-3 protein
11Zinc carboxypeptidase
181735Aldo/keto reductase family
262551Myb-like DNA-binding domain
314Ribosomal protein L16p/L10e
213Ribosomal protein S14p/S29e
161632FKBP-type peptidyl-prolyl cis-trans isomerase
448Glutathione peroxidase
459Flavodoxin
123Calreticulin family
112Common central domain of tyrosinase
6713Aminotransferase class-V
224Ribonucleotide reductase, small chain
5562117DEAD/DEAH box helicase
8092172Helicase conserved C-terminal domain
448Fructose-bisphosphate aldolase class-I
213EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
224Ribosomal protein L23
336Pyridoxal-dependent decarboxylase, C-terminal sheet domain
213Potato inhibitor I family
213Ribosomal protein L5
437Pyridoxal-dependent decarboxylase conserved domain
22Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits
11Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit
358Citrate synthase, C-terminal domain
358GHMP kinases N terminal domain
5712Biotin carboxylase, N-terminal domain
112Tryptophan synthase alpha chain
121123Pyridoxal-phosphate dependent enzyme
242650NUDIX domain
8917pfkB family carbohydrate kinase
325Ribosomal protein L3
213Ribosomal protein L11, RNA binding domain
131831Histidine phosphatase superfamily (branch 1)
213Rubredoxin
112Thymidylate synthase
213Lipoxygenase
639ATP synthase alpha/beta chain, C terminal domain
437Calponin homology (CH) domain
448Glutamine amidotransferases class-II
112Phosphoenolpyruvate carboxylase
448Ribosomal protein S15
112'Cold-shock' DNA-binding domain
123Thaumatin family
7613Fructose-1-6-bisphosphatase, N-terminal domain
224Ribonucleotide reductase, all-alpha domain
314Ribosomal protein S2
448Prolyl oligopeptidase family
11Ribosomal protein L30p/L7e
6915Histidine phosphatase superfamily (branch 2)
11Respiratory-chain NADH dehydrogenase, 30 Kd subunit
336Aconitase family (aconitate hydratase)
11Glycosyl hydrolases family 17
325Ribosomal protein S5, N-terminal domain
336Nucleoside diphosphate kinase
11Tetraspanin family
11Galactoside-binding lectin
314Ribosomal protein S10p/S20e
325Arrestin (or S-antigen), N-terminal domain
224Phosphoglucose isomerase
213SecY translocase
11Respiratory-chain NADH dehydrogenase, 49 Kd subunit
314Ribosomal protein L6
538Polyprenyl synthetase
101121Dynamin family
112Biopterin-dependent aromatic amino acid hydroxylase
112Transcription factor TFIID (or TATA-binding protein, TBP)
91423Rieske [2Fe-2S] domain
33Proton-conducting membrane transporter
111324Biotin-requiring enzyme
224Phosphofructokinase
325Ribosomal protein S17
336FGGY family of carbohydrate kinases, N-terminal domain
121426Enoyl-CoA hydratase/isomerase
325Ribosomal protein S9/S16
224Transcription factor TFIIB repeat
7613Cytidine and deoxycytidylate deaminase zinc-binding region
11Molybdopterin oxidoreductase
369Chromo (CHRromatin Organisation MOdifier) domain
246D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
213Malic enzyme, N-terminal domain
224PEP-utilising enzyme, mobile domain
1126-phosphogluconate dehydrogenase, C-terminal domain
12820WW domain
325Ribosomal RNA adenine dimethylase
102114216WD domain, G-beta repeat
224Heavy-metal-associated domain
3710Adenylate kinase
336Phosphoglucomutase/phosphomannomutase, C-terminal domain
213Ribosomal protein S8
314Ribosomal protein S11
11LIM domain
111223Regulator of chromosome condensation (RCC1) repeat
314Ribosomal protein S13/S18
22Photosystem II protein
347chorismate binding enzyme
45960s Acidic ribosomal protein
11ATP synthase B/B' CF(0)
224Prenyltransferase and squalene oxidase repeat
235Protein kinase C terminal domain
112Single-strand binding protein family
112S-adenosylmethionine synthetase, N-terminal domain
162238Bromodomain
6713Acyl-CoA dehydrogenase, C-terminal domain
151833Ubiquitin carboxyl-terminal hydrolase
213Ribosomal protein L36
11Ribonuclease T2 family
6612HSF-type DNA-binding
448SRP54-type protein, GTPase domain
123Urease alpha-subunit, N-terminal domain
9716Serine carboxypeptidase
213Ribosomal protein L20
161531Phosphatidylinositol 3- and 4-kinase
224Transketolase, thiamine diphosphate binding domain
5510WHEP-TRS domain
6612Inositol monophosphatase family
7714Glutaredoxin
112Isocitrate lyase family
437Serine hydroxymethyltransferase
336Iron-containing alcohol dehydrogenase
134Ribosomal protein L10
5510KOW motif
112Ribosomal protein L34
112Ribosomal protein L33
459RF-1 domain
224Sodium:solute symporter family
112Imidazoleglycerol-phosphate dehydratase
134DNA polymerase family A
224IMP dehydrogenase / GMP reductase domain
123Glucose-6-phosphate dehydrogenase, NAD binding domain
224ROK family
191938Protein phosphatase 2C
112Nucleotidyl transferase
123Carbonic anhydrase
224Phosphoribulokinase / Uridine kinase family
111425Fatty acid desaturase
6814MutS domain V
112Delta-aminolevulinic acid dehydratase
112Arginase family
9817MCM P-loop domain
336Squalene/phytoene synthase
11Bacterial extracellular solute-binding proteins, family 3
141226FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
282351AMP-binding enzyme
112G-protein alpha subunit
222648Chlorophyll A-B binding protein
8917HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
11Cytochrome c oxidase subunit III
224His Kinase A (phospho-acceptor) domain
459Armadillo/beta-catenin-like repeat
171835Tetratricopeptide repeat
141024Ion transport protein
224DNA gyrase/topoisomerase IV, subunit A
134BRCA1 C Terminus (BRCT) domain
91221Glycosyl transferases group 1
6713Glycosyl transferase family 2
224linker histone H1 and H5 family
22Ribosomal protein L7/L12 C-terminal domain
123Urease, gamma subunit
437CoA-ligase
101121Phosphopantetheine attachment site
336Formyl transferase
7916Metallopeptidase family M24
437Leucine Rich Repeat
123alpha/beta hydrolase fold
437RNA polymerase Rpb2, domain 6
224Staphylococcal nuclease homologue
91221Rab-GTPase-TBC domain
112Tudor domain
437Zinc finger, ZZ type
336HRDC domain
141428CBS domain
325Ribosomal protein L13
325Ribosomal protein L4/L1 family
459Clp protease
111021S1 RNA binding domain
112HIUase/Transthyretin family
448AhpC/TSA family
549tRNA synthetases class I (W and Y)
22UvrD/REP helicase N-terminal domain
81220Rhodanese-like domain
202343Acetyltransferase (GNAT) family
112SecE/Sec61-gamma subunits of protein translocation complex
112C-terminal regulatory domain of Threonine dehydratase
235AIR synthase related protein, N-terminal domain
8816tRNA synthetase class II core domain (G, H, P, S and T)
7815SpoU rRNA Methylase family
336Tetrapyrrole (Corrin/Porphyrin) Methylases
112Glycosyl transferase family, a/b domain
9413PDZ domain
123Class II Aldolase and Adducin N-terminal domain
325Diacylglycerol kinase accessory domain
11Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
213Fes/CIP4, and EFC/F-BAR homology domain
235IQ calmodulin-binding motif
123Phosphoinositide 3-kinase family, accessory domain (PIK domain)
123Regulator of G protein signaling domain
549RhoGAP domain
224RhoGEF domain
4711SPRY domain
538RNA polymerase Rpb1, domain 2
437Guanylate kinase
369Gelsolin repeat
81018UBA/TS-N domain
121123PHD-finger
123Filamin/ABP280 repeat
131124HECT-domain (ubiquitin-transferase)
134Helix-hairpin-helix motif
22MSP (Major sperm protein) domain
112Ribonuclease III domain
224Region in Clathrin and VPS
134RanBP1 domain
11PPIC-type PPIASE domain
336Zn-finger in Ran binding protein and others
6612Zinc finger C-x8-C-x5-C-x3-H type (and similar)
112B-box zinc finger
112Poly(ADP-ribose) polymerase catalytic domain
213Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
314F-box domain
112Elongation factor 1 gamma, conserved domain
123Calpain family cysteine protease
192241CRAL/TRIO domain
6814BTB/POZ domain
5510Voltage gated chloride channel
336Caspase domain
123GDSL-like Lipase/Acylhydrolase
112Poly-adenylate binding protein, unique domain
11POLO box duplicated region
11NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
262450ABC transporter transmembrane region
1111Integrase core domain
448FAD binding domain
224Condensation domain
112S-adenosyl-L-homocysteine hydrolase, NAD binding domain
314ribosomal L5P family C-terminus
101020Insulinase (Peptidase family M16)
459Dehydrogenase E1 component
112Lumazine binding domain
101020Elongation factor G C-terminus
347HMGL-like
325DnaJ central domain
61016Sulfotransferase domain
123Starch binding domain
336Ribosomal protein L1p/L10e family
81119Cation transporting ATPase, C-terminus
121325Cation transporter/ATPase, N-terminus
112dUTPase
235Aconitase C-terminal domain
358Amino acid kinase family
112N-(5'phosphoribosyl)anthranilate (PRA) isomerase
8614Acyl transferase domain
123Urease beta subunit
224Dihydrodipicolinate synthetase family
172138haloacid dehalogenase-like hydrolase
112Glycosyl hydrolases family 2
112Glycosyl hydrolases family 18
112Proliferating cell nuclear antigen, N-terminal domain
235Translation initiation factor IF-3, C-terminal domain
112Acylphosphatase
123Adenylosuccinate synthetase
112Asparaginase, N-terminal
235Peptidase S24-like
448Inorganic pyrophosphatase
235Glycosyl hydrolases family 16
213NADH:flavin oxidoreductase / NADH oxidase family
2353-hydroxyacyl-CoA dehydrogenase, C-terminal domain
459HhH-GPD superfamily base excision DNA repair protein
123AIR carboxylase
8816GMC oxidoreductase
437Asparagine synthase
112Fungal cellulose binding domain
112Septin
224EF-1 guanine nucleotide exchange domain
11Photosystem II 10 kDa phosphoprotein
224Homoserine dehydrogenase
112Flavin-binding monooxygenase-like
112Glutamyl-tRNAGlu reductase, dimerisation domain
336tRNA synthetases class I (E and Q), catalytic domain
224tRNA synthetases class I (R)
5611XPG N-terminal domain
9918Metallo-beta-lactamase superfamily
11F5/8 type C domain
112Putative esterase
6814Glycosyl hydrolase family 9
112Ferrochelatase
325Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
112Arginosuccinate synthase
112Electron transfer flavoprotein FAD-binding domain
336RNB domain
112DIX domain
11BTK motif
437Diacylglycerol kinase catalytic domain
91019Dual specificity phosphatase, catalytic domain
11MyTH4 domain
112P21-Rho-binding domain
81018PX domain
257UBX domain
224VHS domain
112Phosphoinositide 3-kinase C2
358Carbon-nitrogen hydrolase
112Prephenate dehydratase
235Syntaxin
224Pumilio-family RNA binding repeat
6713Histone-like transcription factor (CBF/NF-Y) and archaeal histone
224Pterin binding enzyme
235ER lumen protein retaining receptor
224Glycoprotease family
112Histidinol dehydrogenase
347impB/mucB/samB family
112Ribosomal L15
448Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
213Ribosomal prokaryotic L21 protein
112Ribosomal L28 family
213Ribosomal L29 protein
11Ribosomal L39 protein
112Ribosomal S17
224Ribulose-phosphate 3 epimerase family
112Translationally controlled tumour protein
369AP2 domain
112Ring hydroxylating alpha subunit (catalytic domain)
101626RNA pseudouridylate synthase
101020Histone deacetylase domain
213Glycosyltransferase family 10 (fucosyltransferase) C-term
112POT family
325PWWP domain
142135SET domain
336Isochorismatase family
325Permease family
213Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
5611XPG I-region
549DNA photolyase
224Nitroreductase family
336Cytosol aminopeptidase family, catalytic domain
6814Sulfatase
2246,7-dimethyl-8-ribityllumazine synthase
213Ribosomal protein S16
246Acyl CoA binding protein
11920Cullin family
224Elongation factor TS
538FAD binding domain
51318EamA-like transporter family
91019ThiF family
112Ribosomal family S4e
22Sec-independent protein translocase protein (TatC)
134Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
224Ammonium Transporter Family
121022Sulfate permease family
11MATH domain
336Uncharacterized protein family UPF0004
224Dehydratase family
224Transaldolase/Fructose-6-phosphate aldolase
235Mechanosensitive ion channel
336GTP cyclohydrolase II
1123,4-dihydroxy-2-butanone 4-phosphate synthase
448Adaptor complexes medium subunit family
6612Exonuclease
11NB-ARC domain
213Lamin Tail Domain
448Glycosyl hydrolase family 3 N terminal domain
112Ribosomal protein L44
11DNA-dependent RNA polymerase
224FAD binding domain in molybdopterin dehydrogenase
112Glycosyl transferase family 4
224HCO3- transporter family
325Nucleosome assembly protein (NAP)
6612Synaptobrevin
224Adenosine/AMP deaminase
448Oxidoreductase FAD-binding domain
6612Thioesterase domain
224Histidine biosynthesis protein
347Glycosyltransferase family 20
112UDP-glucose/GDP-mannose dehydrogenase family, central domain
112DNA gyrase B subunit, carboxyl terminus
224Carbamoyl-phosphate synthase small chain, CPSase domain
178PAS fold
224Probable molybdopterin binding domain
448Sec1 family
235GDP dissociation inhibitor
111223Sodium/hydrogen exchanger family
415RNA polymerase Rpb3/RpoA insert domain
22Inward rectifier potassium channel transmembrane domain
459Initiation factor 2 subunit family
224Electron transfer flavoprotein domain
112Uricase
112Ribosomal S3Ae family
213Ribosomal L27 protein
437GTP1/OBG
112Gamma-glutamyltranspeptidase
112Ribosomal L40e family
437GrpE
448TatD related DNase
235Inhibitor of apoptosis-promoting Bax1
112Eukaryotic DNA topoisomerase I, catalytic core
112NusB family
268Dynamin central region
1126-O-methylguanine DNA methyltransferase, DNA binding domain
11Bacteriorhodopsin-like protein
358Carboxyl transferase domain
6612UbiA prenyltransferase family
22DegT/DnrJ/EryC1/StrS aminotransferase family
112Endoribonuclease L-PSP
213SecA preprotein cross-linking domain
336Phosphorylase superfamily
4610Cys/Met metabolism PLP-dependent enzyme
235Glycosyl hydrolases family 31
112NADH ubiquinone oxidoreductase, 20 Kd subunit
343872ABC-2 type transporter
4610Bestrophin, RFP-TM, chloride channel
5510Amino-transferase class IV
6612CDP-alcohol phosphatidyltransferase
112Calpain large subunit, domain III
235ATP dependent DNA ligase domain
224FMN-dependent dehydrogenase
224Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
1233-beta hydroxysteroid dehydrogenase/isomerase family
112Glycosyl hydrolases family 38 N-terminal domain
224Nitrite and sulphite reductase 4Fe-4S domain
11Magnesium chelatase, subunit ChlI
112Presenilin
112KDPG and KHG aldolase
22Copper type II ascorbate-dependent monooxygenase, N-terminal domain
314Ribosomal protein S18
11Clathrin light chain
336Ubiquitin carboxyl-terminal hydrolase, family 1
11Ribosomal protein S19e
112Ribosomal protein S6e
11Receptor family ligand binding region
347Transcription factor S-II (TFIIS)
112Surface antigen
448emp24/gp25L/p24 family/GOLD
325NifU-like domain
213Cyclin-dependent kinase regulatory subunit
224Asparaginase
213Dihydrodipicolinate reductase, N-terminus
112F-actin capping protein, beta subunit
112Fructose-bisphosphate aldolase class-II
437Semialdehyde dehydrogenase, NAD binding domain
11DNA mismatch repair protein, C-terminal domain
123Dephospho-CoA kinase
459MAPEG family
112G10 protein
123Heme oxygenase
213Succinate dehydrogenase/Fumarate reductase transmembrane subunit
1122-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
51116CD36 family
448DNA topoisomerase
224Elongation factor P (EF-P) OB domain
112Enhancer of rudimentary
112Glucose inhibited division protein A
224Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
11Peptidase family U32
224RNA 3'-terminal phosphate cyclase
98173' exoribonuclease family, domain 1
112tRNA-splicing ligase RtcB
123tRNA pseudouridine synthase D (TruD)
213Coenzyme A transferase
5510SPFH domain / Band 7 family
459Cytidylyltransferase family
224Formamidopyrimidine-DNA glycosylase N-terminal domain
224GDA1/CD39 (nucleoside phosphatase) family
91120GNS1/SUR4 family
112Hydroxymethylglutaryl-coenzyme A synthase N terminal
112Inosine-uridine preferring nucleoside hydrolase
123Ribosomal protein L21e
11Ribosomal protein L36e
112Ribosomal protein L6e
325Phosphatidylethanolamine-binding protein
336RIO1 family
112Ribosomal protein S21
224Tub family
112Alanine racemase, N-terminal domain
235Uncharacterized protein family UPF0016
246Putative RNA methylase family UPF0020
336PP-loop family
112Shwachman-Bodian-Diamond syndrome (SBDS) protein
112SNO glutamine amidotransferase family
437Translation initiation factor 1A / IF-1
123Copper amine oxidase, enzyme domain
112Dihydroorotate dehydrogenase
224Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
325Macrophage migration inhibitory factor (MIF)
112
691516S rRNA methyltransferase RsmB/F
112RNA polymerase Rpb5, C-terminal domain
112RNA polymerase Rpb6
415RNA polymerase Rpb3/Rpb11 dimerisation domain
112RNA polymerases N / 8 kDa subunit
11Peptidyl-tRNA hydrolase
224Ribosomal protein L17
11Ribosomal protein L31
112Ribosomal protein L31e
112Ribosomal protein L34e
112Ribosomal protein S28e
224Ribosomal protein S8e
112Shikimate kinase
224Trehalase
224Uncharacterized protein family UPF0029
6713Dihydrouridine synthase (Dus)
224Uroporphyrinogen decarboxylase (URO-D)
347ubiE/COQ5 methyltransferase family
246NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
224Beta-eliminating lyase
112Adenylate cyclase associated (CAP) N terminal
336Casein kinase II regulatory subunit
112Cytochrome c oxidase subunit Vb
7815Clathrin adaptor complex small chain
224Coproporphyrinogen III oxidase
224Dynein light chain type 1
224Ergosterol biosynthesis ERG4/ERG24 family
112DNA/RNA non-specific endonuclease
224Formate/nitrite transporter
112GTP cyclohydrolase I
549HIT domain
224Indoleamine 2,3-dioxygenase
112Mannitol dehydrogenase Rossmann domain
112Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain
112Phosphomannose isomerase type I
235Protein prenyltransferase alpha subunit repeat
2246-pyruvoyl tetrahydropterin synthase
224Pyridoxamine 5'-phosphate oxidase
213Ribosomal protein L19
224Ribosomal protein L24e
11Ribosomal protein L35Ae
5712Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
112Ribosomal protein S21e
213Ribosomal protein S6
112Ribosomal protein S7e
112Translation initiation factor SUI1
123Putative undecaprenyl diphosphate synthase
11Carbohydrate kinase
112Thioredoxin-like [2Fe-2S] ferredoxin
112SAICAR synthetase
123Xylose isomerase-like TIM barrel
224Alanine dehydrogenase/PNT, C-terminal domain
336Aldose 1-epimerase
11Chorismate synthase
224Cytochrome c/c1 heme lyase
9918FAD dependent oxidoreductase
112F-actin capping protein alpha subunit
112Formate--tetrahydrofolate ligase
112Fibrillarin
336Glycosyl hydrolases family 8
325Malate synthase
134Orn/Lys/Arg decarboxylase, major domain
112Ribosomal protein L19e
112Ribosomal protein L9, N-terminal domain
112Ribosomal protein S24e
112Ribosomal protein S26e
112Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold
1127,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
213Phosphoenolpyruvate carboxykinase
112Ribosomal protein L13e
112Telomere recombination
448CAP-Gly domain
224Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
224Creatinase/Prolidase N-terminal domain
224Pyruvate phosphate dikinase, PEP/pyruvate binding domain
112Polypeptide deformylase
235Pterin 4 alpha carbinolamine dehydratase
11mRNA capping enzyme, catalytic domain
11Apocytochrome F, C-terminal
6612OB-fold nucleic acid binding domain
22Glycosyl hydrolases family 6
336Peptidase family S49
336Kelch motif
123Ribonuclease HII
112Poly A polymerase regulatory subunit
91322FYVE zinc finger
2245'-3' exonuclease, C-terminal SAM fold
314DHH family
336Sec7 domain
261945NAD dependent epimerase/dehydratase family
112Porphobilinogen deaminase, dipyromethane cofactor binding domain
224SIS domain
11Helix-turn-helix
112Phosphate transporter family
112Ribosomal L25p family
123ARID/BRIGHT DNA binding domain
123Collagen triple helix repeat (20 copies)
7714JAB1/Mov34/MPN/PAD-1 ubiquitin protease
171532PCI domain
11Photosystem II reaction centre T protein
235tRNA synthetases class I (C) catalytic domain
9918Oxidoreductase family, NAD-binding Rossmann fold
224tRNA synthetases class II core domain (F)
336tRNA synthetases class II (A)
8917Putative GTPase activating protein for Arf
5510tRNA pseudouridine synthase
224ENTH domain
11Jacalin-like lectin domain
141832LSM domain
347R3H domain
6511Amidase
11BAH domain
426AN1-like Zinc finger
112Hsp33 protein
224Peptidase family M3
549Peptidase family M1 domain
549Peptidase family M41
448Peptidase family M48
123NHL repeat
11ELM2 domain
112Acetohydroxy acid isomeroreductase, catalytic domain
224Low molecular weight phosphotyrosine protein phosphatase
11D-mannose binding lectin
112MAGE family
11Mucin-like glycoprotein
123Leishmanolysin
213Uncharacterized protein family (UPF0051)
235Eukaryotic porin
336GRIP domain
213Skp1 family, dimerisation domain
527Cytidylyltransferase-like
11Pyroglutamyl peptidase
224PUA domain
112Class-II DAHP synthetase family
213LysM domain
9918S4 domain
123PWI domain
6814IBR domain, a half RING-finger domain
112Type I 3-dehydroquinase
224Shikimate / quinate 5-dehydrogenase
141529Transmembrane amino acid transporter protein
112Frataxin-like domain
224GXGXG motif
101323FAD binding domain
224V-type ATPase 116kDa subunit family
112Periplasmic binding protein
325Glycosyl transferase family 8
112Phosphoribosyl-AMP cyclohydrolase
11Phosphoribosyl-ATP pyrophosphohydrolase
5510Phosphatidylinositol-4-phosphate 5-Kinase
437Phosphoadenosine phosphosulfate reductase family
224TruB family pseudouridylate synthase (N terminal domain)
112Respiratory-chain NADH dehydrogenase 51 Kd subunit
235ATP-NAD kinase
336Iron-sulphur cluster biosynthesis
123Polysaccharide deacetylase
8917DHHC palmitoyltransferase
347Glycosyl hydrolase family 47
394180PPR repeat
112Adenosylmethionine decarboxylase
11GIY-YIG catalytic domain
459CorA-like Mg2+ transporter protein
4610Cation efflux family
459Peptidase family M20/M25/M40
71118Acyltransferase
7916MatE
6612DnaJ C terminal domain
224Fumarylacetoacetate (FAA) hydrolase family
11Reprolysin family propeptide
112Spermine/spermidine synthase domain
121224FAD binding domain
224Natural resistance-associated macrophage protein
156PAP2 superfamily
336Aminomethyltransferase folate-binding domain
336MaoC like domain
11Cytochrome C assembly protein
112Adenylylsulphate kinase
5611G-patch domain
336Putative tRNA binding domain
3586-phosphofructo-2-kinase
112NifU-like N terminal domain
8311Flavin containing amine oxidoreductase
224AI-2E family transporter
7613Cyclin M transmembrane N-terminal domain
112O-methyltransferase
112Glycine cleavage H-protein
112Ribosomal protein S27a
10919Adaptin N terminal region
235Protein phosphatase 2A regulatory B subunit (B56 family)
3693'-5' exonuclease
112Proline dehydrogenase
347MutS domain I
6511Peptide methionine sulfoxide reductase
11Hpt domain
213Ribosomal protein L35
224Choline/ethanolamine kinase
112ATP phosphoribosyltransferase
4610Phosphotransferase enzyme family
224SelR domain
112Methylmalonyl-CoA mutase
123Conserved region in glutamate synthase
3364'-phosphopantetheinyl transferase superfamily
11Ribosomal protein S20
213Peptidase C13 family
538Eukaryotic initiation factor 4E
112NAD-dependent DNA ligase adenylation domain
112Ribosomal protein L32
123CobQ/CobB/MinD/ParA nucleotide binding domain
224Myo-inositol-1-phosphate synthase
224Macro domain
112Type I phosphodiesterase / nucleotide pyrophosphatase
11Ribosomal protein S27
112SmpB protein
11Diaminopimelate epimerase
213SOR/SNZ family
325Riboflavin kinase
11Caulimovirus viroplasmin
5712Rhomboid family
10111Glycosyltransferase family 92
448Sodium/calcium exchanger protein
11Photosystem I reaction centre subunit IX / PsaJ
246Queuine tRNA-ribosyltransferase
5510UTP--glucose-1-phosphate uridylyltransferase
224Transcriptional regulator
538Smr domain
112IPP transferase
213Manganese-stabilising protein / photosystem II polypeptide
325Cobalamin-independent synthase, Catalytic domain
459BolA-like protein
224Ham1 family
7512FtsJ-like methyltransferase
112Quinolinate phosphoribosyl transferase, C-terminal domain
112UreF
336Nucleoside transporter
10919Patatin-like phospholipase
213Lysophospholipase catalytic domain
11YCF9
224Dienelactone hydrolase family
7512STAS domain
224Poly A polymerase head domain
145tRNA (Guanine-1)-methyltransferase
224ATP-sulfurylase
224Importin beta binding domain
5510Toprim domain
81321MYND finger
213A20-like zinc finger
55Glycosyltransferase family 25 (LPS biosynthesis protein)
235Acyl-CoA oxidase
7411Acyltransferase family
336Sodium Bile acid symporter family
2243-dehydroquinate synthase
123Galactosyltransferase
262450Lipase (class 3)
224Ribosome recycling factor
112Divalent cation transporter
11UreD urease accessory protein
112Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
112Ribosomal L22e protein family
112Ribosomal L27e protein family
224Ribosomal L28e protein family
112Ribosomal L29e protein family
112Ribosomal L37ae protein family
11Ribosomal L38e protein family
213Ribosomal L32p protein family
437Alternative oxidase
11PsbJ
459PsbP
235Glycolipid 2-alpha-mannosyltransferase
33Ferric reductase like transmembrane component
112MraW methylase family
336snoRNA binding domain, fibrillarin
224[2Fe-2S] binding domain
235Surp module
112CHC2 zinc finger
112AICARFT/IMPCHase bienzyme
112Putative membrane protein insertion efficiency factor
3145-formyltetrahydrofolate cyclo-ligase family
112ATP synthase subunit D
336WSC domain
426Trypsin Inhibitor like cysteine rich domain
224IPT/TIG domain
336FG-GAP repeat
11Transglutaminase-like superfamily
347ACT domain
448HNH endonuclease
213FF domain
213NAC domain
224Proteasome/cyclosome repeat
5712START domain
224MOZ/SAS family
11Retinoblastoma-associated protein B domain
224Putative diphthamide synthesis protein
11Domain of unknown function UPF0086
112AMMECR1
22RibD C-terminal domain
224Domain found in IF2B/IF5
112Memo-like protein
112RNase P subunit p30
112EVE domain
235Iron-sulfur cluster assembly protein
224Uncharacterised protein family UPF0047
112DNA primase small subunit
213Rpp14/Pop5 family
336Diphthamide synthase
112CbiX
112Protein of unknown function DUF72
11Ribosomal protein L37e
426Nucleotidyltransferase domain
112eIF-6 family
448Glycosyl hydrolase family 3 C-terminal domain
112Deoxyhypusine synthase
33Alba
448Prefoldin subunit
11SRP19 protein
112Cobalamin adenosyltransferase
358Sulfite exporter TauE/SafE
22254750S ribosome-binding GTPase
112Mut7-C RNAse domain
11CYTH domain
112Ribosomal protein L14
11Protein of unknown function DUF84
112Protein of unknown function DUF89
224TRAM domain
224Integral membrane protein DUF92
11Thi4 family
112Archease protein family (MTH1598/TM1083)
123Integral membrane protein EMC3/TMCO1-like
1123-dehydroquinate synthase II
112ArgJ family
123TraB family
112Radical SAM ThiC family
213DJ-1/PfpI family
123HD domain
112MoaC family
224Hydantoinase/oxoprolinase
112Protein of unknown function DUF111
112tRNA intron endonuclease, catalytic C-terminal domain
459Amidohydrolase family
112tRNA-methyltransferase O
224Peptidyl-tRNA hydrolase PTH2
112Double-stranded DNA-binding domain
123CRS1 / YhbY (CRM) domain
246Mitochondrial biogenesis AIM24
134VIT family
112ATP synthase (F/14-kDa) subunit
11ATP synthase (E/31 kDa) subunit
112ATP synthase (C/AC39) subunit
11Translin family
112TFIIE alpha subunit
112N2,N2-dimethylguanosine tRNA methyltransferase
224eIF4-gamma/eIF5/eIF2-epsilon
22Ribosome-binding factor A
246SCP-2 sterol transfer family
151429SAP domain
112RWP-RK domain
112CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
11Cytochrome c oxidase subunit VIa
224Melibiase
123Carboxypeptidase Taq (M32) metallopeptidase
34760Kd inner membrane protein
123Josephin
112SURF1 family
112DAD family
123Phosducin
112Phosphotriesterase family
112Aminopeptidase I zinc metalloprotease (M18)
314X-Pro dipeptidyl-peptidase (S15 family)
112Uncharacterized protein family UPF0054
112Permease for cytosine/purines, uracil, thiamine, allantoin
459
325TAZ zinc finger
224Nuclear transport factor 2 (NTF2) domain
8715Beige/BEACH domain
9716DENN (AEX-3) domain
336MGS-like domain
11Repair protein Rad1/Rec1/Rad17
448Sir2 family
6612Zn-finger in ubiquitin-hydrolases and other protein
112Kinase associated domain 1
11RNA polymerases M/15 Kd subunit
112Prephenate dehydrogenase
369Peptidase family M50
112Cytochrome C1 family
112PAZ domain
112Piwi domain
11TRAF-type zinc finger
123Formin Homology 2 Domain
112HAT (Half-A-TPR) repeat
459ATP-dependent protease La (LON) substrate-binding domain
11Regulatory subunit of type II PKA R-subunit
224SWIB/MDM2 domain
336Vacuolar sorting protein 9 (VPS9) domain
235Putative zinc finger in N-recognin (UBR box)
11Villin headpiece domain
112Dynamin GTPase effector domain
123GYF domain
336Methylenetetrahydrofolate reductase
5611ML domain
112ATP-grasp domain
112Thymidylate kinase
6713PA domain
224Phospholipase/Carboxylesterase
112NAD(P) transhydrogenase beta subunit
112Methylpurine-DNA glycosylase (MPG)
235Proteasome activator pa28 beta subunit
112TrkA-N domain
112Iron hydrogenase small subunit
336FAT domain
5510FATC domain
347Guanylate-binding protein, N-terminal domain
112Transcription initiation factor IIA, gamma subunit, helical domain