PFAM Domains • Chlorophyta
Annotations/GenomesAstpho2Auxeprot1Batpra1ChlNC64A_1Chlre4Chrzof1Coc_C169_1Dicre1Dunsal1Gonpec1MicpuC3v2MicpuN3v2Monneg1Ost9901_3OstRCC809_2Ostta1115_2Ostta4221_3Picsp_1Rapsub1SceoblEN4_1Sobl393_1SymretAf1SymretSc1SymretSp1SymretSw1Volca1TotalAnnotation Description
PFAMs
7,9526,9667,8876,6897,56512,0577,7979,75010,95812,1488,0298,40910,4015,4773,1168,2817,7967,19811,19710,78213,70410,0489,9649,95710,0633,419227,610
60445048526250566161585756462955514762577058585758371,400ATPase family associated with various cellular activities (AAA)
57464360647355765782525390472348455282758974728073301,598ABC transporter
436346455455653134765555552130ATP synthase alpha/beta family, nucleotide-binding domain
31393111132129EGF-like domain
2117191617252020252121211921142321222121271919191910518Elongation factor Tu GTP binding domain
33128553422131211515533473Helix-loop-helix DNA-binding domain
1322368671673443144265767861141Hsp20/alpha crystallin family
128911891091215111011104810799899995241Hsp70 protein
12121713131311121312333310211422231115813131313134387KH domain
121112211113Kunitz/Bovine pancreatic trypsin inhibitor domain
2222142116Ribulose bisphosphate carboxylase large chain, catalytic domain
1214SH2 domain
11111117SH3 domain
9312TNFR/NGFR cysteine-rich region
667451266674486477495866662157Actin
531151111074637155499911112657187101121143414151512281,022Ankyrin repeat
1212122333141152363333174PAN domain
11887161188121410111175777121114888811248ADP-ribosylation factor family
2113318101122142332247991191102Eukaryotic aspartyl protease
22511718241216162829321611515155201427171816183420Cyclic nucleotide-binding domain
12148Beta/Gamma crystallin
111211112211111119Cystatin domain
13111111711120Cytochrome b(C-terminal)/b6/petD
21234121112211111111111134Cytochrome c
322241412121123132Double-stranded RNA binding motif
4314010123343989363518121314135525EF hand
3116615213314211211454Fe-4S binding domain
11Fibronectin type II domain
22184521342372111713561111185Fibronectin type III domain
111249Globin
123569141288111211933662391098891197Glutathione S-transferase, C-terminal domain
3344323343553333324353333285Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
313222111117144521111155Homeodomain
1167223315132222245Kazal-type serine protease inhibitor domain
711322218Kringle domain
112Laminin B (Domain IV)
12121111212Laminin EGF domain
55655664555545545466744444128lactate/malate dehydrogenase, NAD binding domain
1527659246Lectin C-type domain
23171213461131667222281Ligand-gated ion channel
3323333233229111136242232271Myosin head (motor domain)
21115LNR domain
2211102035493832343812125210611106334556313031316671Cytochrome P450
2114Phospholipase A2
18210688200423257150200246584122134304102509795982822222832122072032051885,240Protein kinase domain
1599151618161511181214711810810131519151515158337Pyridine nucleotide-disulphide oxidoreductase
189121214191413143013151512512139181719131313137362Ras family
11497121087141413118841387981367773228Response regulator receiver domain
1122122111216RNase H
9259508885978478888183799459264752601188910377737777381,954RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
31383661331294Reverse transcriptase (RNA-dependent DNA polymerase)
211412126525Serpin (serine protease inhibitor)
233313318Copper/zinc superoxide dismutase (SODC)
641544635411311135553333282Iron/manganese superoxide dismutases, alpha-hairpin domain
11115191019121117218638223211305789111111112430Subtilase family
12129191622222187762815412117252837211921207416Sugar (and other) transporter
2114Sushi repeat (SCR repeat)
3026392826352930323943443425163736294237473333333311847Thioredoxin
111111111110Trefoil (P-type) domain
10123491111947141019342211251011111114115261Trypsin
243213111131124Thrombospondin type 1 domain
9674101067911881084777991077779203Tubulin/FtsZ family, GTPase domain
3165221111211213222241von Willebrand factor type A domain
721082312313171011111321211598Zinc finger, C2H2 type
554453796545477477748165457710754628581Zinc finger, C3HC4 type (RING finger)
151101712281081614171791025851118119118126290Zinc knuckle
1132211122322321222121111345Ribulose bisphosphate carboxylase, small chain
2135113112114131111236Protein-tyrosine phosphatase
57222441365870544135383546191022232346425854555354171,033short chain dehydrogenase
231081313222319161310101712111912121518171718195363Zinc-binding dehydrogenase
2214222222113112112212222348Thiolase, N-terminal domain
3123134413111151061282514106105201916121235Beta-ketoacyl synthase, N-terminal domain
9771513101071111910885675121115777792332Fe-2S iron-sulfur cluster binding domain
97716152788416810389510989438688984389Papain family cysteine protease
1111112111113111112221111132Enolase, C-terminal TIM barrel domain
21418Cytochrome C and Quinol oxidase polypeptide I
11111131112115Cytochrome C oxidase subunit II, periplasmic domain
756657688777364866751188885172Glutamine amidotransferase class-I
13121111121311121415121121148111110131112121111128312TCP-1/cpn60 chaperonin family
121114111ATP synthase A chain
3113545335335112134443333278Glutamine synthetase, catalytic domain
22321122113224232211222247Triosephosphate isomerase
13141515202416161918131522158171415242233171719165442E1-E2 ATPase
22217Photosynthetic reaction centre protein
29261633124313520681261616191251013153640272020202044841Core histone H2A/H2B/H3/H4
111111118Bacterial regulatory helix-turn-helix protein, lysR family
1211111111221111111111111230Copper binding proteins, plastocyanin/azurin family
11679810118106151679888881317988810246Alpha amylase, catalytic domain
112Phorbol esters/diacylglycerol binding domain (C1 domain)
1087812101597816109866671391099998238Bacterial transferase hexapeptide (six repeats)
47685757655599166666866764156tRNA synthetases class I (I, L, M and V)
8796141671172278151058871821261110101112294Cyclin, N-terminal domain
11122111111Carboxylesterase family
65354757564443233553667763124DNA polymerase family B
3142422244234419342222222274ATP synthase subunit C
2211221415Legume lectin domain
11111218Sigma-70 factor, region 1.2
53436126574359314454101255553138Peroxidase
114Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
11223232112213430Beta-lactamase
4376510756912865356268105555153C-5 cytosine-specific DNA methylase
11316NADH dehydrogenase
134Fibrinogen beta and gamma chains, C-terminal globular domain
112Nitrogenase component 1 type Oxidoreductase
332324392525333423223030232015191923282738363635368704Calcineurin-like phosphoesterase
282213102225115134913141622242325236Cellulase (glycosyl hydrolase family 5)
65655856656697466466655555148tRNA synthetases class II (D, K and N)
37283732444841375343434748421639392440445139364036221,006Mitochondrial carrier protein
111131111111111111121recA bacterial DNA recombination protein
17161111112220172419141429127151211242222171717177425Aminotransferase class I and II
94659774668849266486844443151Phosphoribosyl transferase domain
21111231112111120Sigma-54 interaction domain
171726182423192126242728172372626182327222021222116559Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
222221323322622222232222257Phosphoglycerate kinase
323112221222311522321223252Ribosomal protein S4/S9 N-terminal domain
1221221122113116123221111144Ribosomal protein S12/S23
4444444444334413344464444196Chaperonin 10 Kd subunit
177716282614131220161910114886131219131311126341C2 domain
93285756747725233564688872139PH domain
1075761712234109985368101591226262329299bZIP transcription factor
10858811914711571562978101115141414147249Aldehyde dehydrogenase family
1471961411127121022221019132020814131667778324Cytochrome b5-like Heme/Steroid binding domain
2132233231334212224362222264Oxidoreductase molybdopterin binding domain
108911812101312119914115999121319131313135280Oxidoreductase NAD-binding domain
242023191734272626272730312192323193327362727262712641SNF2 family N-terminal domain
1132231132113116123231111148Ribosomal protein S7p/S5e
201718232117242326231920171361414152121312423232313509Ubiquitin-conjugating enzyme
432345442421732234354444285Isocitrate/isopropylmalate dehydrogenase
3232222222222217222232222158Ribosomal Proteins L2, RNA binding domain
11316Chitinase class I
3344343453444433434323333389Hsp90 protein
2222232222221212222222222150Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111121111111111112222130Dihydrofolate reductase
1236Chitin recognition protein
228136151616371215111113114Cysteine-rich secretory protein family
11312211221131613322111143Ribosomal protein S3, C-terminal domain
3141625313566753Cupin
141111119Annexin
11434215311412591111253Eukaryotic-type carbonic anhydrase
1122111110Chalcone and stilbene synthases, N-terminal domain
554466555344553445554555541202-oxoacid dehydrogenases acyltransferase (catalytic domain)
211124211111212222130Catalase
21421432120Disintegrin
1131371911107101420191922158UDP-glucoronosyl and UDP-glucosyl transferase
77387878974695244598688884169Aminotransferase class-III
1131112221121171222211139Ribosomal protein S19
2222222222222223222232222153DNA gyrase B
431423435211312143353333168Thiamine pyrophosphate enzyme, central domain
3443133332444424433343333181Lyase
112122312Alpha-2-macroglobulin family
524233332332463333259Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
2114Sodium:neurotransmitter symporter family
411423621211221112322222252Ferritin-like domain
1212165211181081281161343916251919192039542Adenylate and Guanylate cyclase catalytic domain
222222222222322223222222151ATP synthase delta (OSCP) subunit
111111111111121111111111126Orotidine 5'-phosphate decarboxylase / HUMPS family
11111111111111111118Bacterial DNA-binding protein
1111122222112112122222222141Indole-3-glycerol phosphate synthase
1111116Aromatic amino acid lyase
538Photosystem I psaA/psaB protein
6565795597881221325981255554158Pyruvate kinase, barrel domain
371412263535232346403239401541515173628342423252326687Kinesin motor domain
49456048596049475144808239571953593952496448494847221,319DnaJ domain
21151614151716161516151614188161615171419161617168402Proteasome subunit
11TNF(Tumour Necrosis Factor) family
106538781381135101288881124Major intrinsic protein
2222222232224221222222222153ATP synthase
61221483441411111108143333107Glycosyl hydrolase family 1
1123226103172719465222269916181817122483'5'-cyclic nucleotide phosphodiesterase
3132110Protease inhibitor/seed storage/LTP family
111112111111211111222111130Profilin
3333333333333323334313333174Ribosomal protein L22p/L17e
233222222211318133222222358Ribosomal protein L14p/L23e
88Resolvase, N terminal domain
20121112202022183725181920645992016251820