PFAM Domains • Mesostigmatophyceae
Annotations/GenomesMesovir1Mesvir1TotalAnnotation Description
PFAMs
8,35121,35429,705
54127181ATPase family associated with various cellular activities (AAA)
55157212ABC transporter
11718ATP synthase alpha/beta family, nucleotide-binding domain
163955Elongation factor Tu GTP binding domain
134Helix-loop-helix DNA-binding domain
111425Hsp20/alpha crystallin family
142741Hsp70 protein
31417KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
131932Actin
50127177Ankyrin repeat
91423ADP-ribosylation factor family
213Eukaryotic aspartyl protease
146175Cyclic nucleotide-binding domain
123Beta/Gamma crystallin
112Cystatin domain
224Cytochrome c
123Double-stranded RNA binding motif
279EF hand
554Fe-4S binding domain
347Fibronectin type III domain
3710Globin
5712Glutathione S-transferase, C-terminal domain
6511Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
145Homeodomain
123Kazal-type serine protease inhibitor domain
257Kringle domain
11Laminin EGF domain
369lactate/malate dehydrogenase, NAD binding domain
31417Lectin C-type domain
257Myosin head (motor domain)
12223LNR domain
103040Cytochrome P450
161369530Protein kinase domain
102535Pyridine nucleotide-disulphide oxidoreductase
132538Ras family
3591126Response regulator receiver domain
5195146RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
16263Reverse transcriptase (RNA-dependent DNA polymerase)
123Serpin (serine protease inhibitor)
235Copper/zinc superoxide dismutase (SODC)
325Iron/manganese superoxide dismutases, alpha-hairpin domain
112839Subtilase family
5914Sugar (and other) transporter
276188Thioredoxin
11213Trypsin
31821Thrombospondin type 1 domain
62026Tubulin/FtsZ family, GTPase domain
41519von Willebrand factor type A domain
279Zinc finger, C2H2 type
52126Zinc finger, C3HC4 type (RING finger)
102030Zinc knuckle
224Ribulose bisphosphate carboxylase, small chain
112Protein-tyrosine phosphatase
224870short chain dehydrogenase
132033Zinc-binding dehydrogenase
5712Thiolase, N-terminal domain
279Beta-ketoacyl synthase, N-terminal domain
69152Fe-2S iron-sulfur cluster binding domain
347Papain family cysteine protease
336Enolase, C-terminal TIM barrel domain
11Cytochrome C oxidase subunit II, periplasmic domain
7714Glutamine amidotransferase class-I
102030TCP-1/cpn60 chaperonin family
459Glutamine synthetase, catalytic domain
347Triosephosphate isomerase
165066E1-E2 ATPase
11Photosynthetic reaction centre protein
101020Core histone H2A/H2B/H3/H4
112Copper binding proteins, plastocyanin/azurin family
91726Alpha amylase, catalytic domain
22Phorbol esters/diacylglycerol binding domain (C1 domain)
112536Bacterial transferase hexapeptide (six repeats)
41822tRNA synthetases class I (I, L, M and V)
6915Cyclin, N-terminal domain
11011DNA polymerase family B
257ATP synthase subunit C
123Legume lectin domain
66Sigma-70 factor, region 1.2
41317Peroxidase
123Beta-lactamase
61925C-5 cytosine-specific DNA methylase
55NADH dehydrogenase
11Nitrogenase component 1 type Oxidoreductase
163450Calcineurin-like phosphoesterase
1010Cellulase (glycosyl hydrolase family 5)
51015tRNA synthetases class II (D, K and N)
314879Mitochondrial carrier protein
358recA bacterial DNA recombination protein
162238Aminotransferase class I and II
3710Phosphoribosyl transferase domain
11Sigma-54 interaction domain
183048Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
112Phosphoglycerate kinase
134Ribosomal protein S4/S9 N-terminal domain
112Ribosomal protein S12/S23
235Chaperonin 10 Kd subunit
184361C2 domain
31821PH domain
92130bZIP transcription factor
71219Aldehyde dehydrogenase family
81422Cytochrome b5-like Heme/Steroid binding domain
156Oxidoreductase molybdopterin binding domain
71623Oxidoreductase NAD-binding domain
3269101SNF2 family N-terminal domain
112Ribosomal protein S7p/S5e
182745Ubiquitin-conjugating enzyme
4610Isocitrate/isopropylmalate dehydrogenase
235Ribosomal Proteins L2, RNA binding domain
369Hsp90 protein
235Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
134Dihydrofolate reductase
11Cysteine-rich secretory protein family
77Ribosomal protein S3, C-terminal domain
41014Eukaryotic-type carbonic anhydrase
611172-oxoacid dehydrogenases acyltransferase (catalytic domain)
112Catalase
123UDP-glucoronosyl and UDP-glucosyl transferase
5914Aminotransferase class-III
123Ribosomal protein S19
325DNA gyrase B
134Thiamine pyrophosphate enzyme, central domain
336Lyase
134Alpha-2-macroglobulin family
33Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
112Sodium:neurotransmitter symporter family
123Ferritin-like domain
48176224Adenylate and Guanylate cyclase catalytic domain
224ATP synthase delta (OSCP) subunit
235Orotidine 5'-phosphate decarboxylase / HUMPS family
112Bacterial DNA-binding protein
3811ATP:guanido phosphotransferase, C-terminal catalytic domain
235Indole-3-glycerol phosphate synthase
134Aromatic amino acid lyase
33Photosystem I psaA/psaB protein
71017Pyruvate kinase, barrel domain
44112156Kinesin motor domain
3468102DnaJ domain
111627Proteasome subunit
257Major intrinsic protein
246ATP synthase
491862353'5'-cyclic nucleotide phosphodiesterase
224Profilin
22Ribosomal protein L22p/L17e
77Ribosomal protein L14p/L23e
111829Ubiquitin family
123Cofilin/tropomyosin-type actin-binding protein
12314-3-3 protein
112Alkaline phosphatase
51015Zinc carboxypeptidase
213354Aldo/keto reductase family
164258Myb-like DNA-binding domain
66Ribosomal protein L16p/L10e
112Ribosomal protein S14p/S29e
132538FKBP-type peptidyl-prolyl cis-trans isomerase
213Glutathione peroxidase
51621Flavodoxin
224Calreticulin family
112Thymidine kinase
7148155Aminotransferase class-V
112Ribonucleotide reductase, small chain
54130184DEAD/DEAH box helicase
76263339Helicase conserved C-terminal domain
358Fructose-bisphosphate aldolase class-I
358EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22Ribosomal protein L23
369Pyridoxal-dependent decarboxylase, C-terminal sheet domain
44Ribosomal protein L5
459Pyridoxal-dependent decarboxylase conserved domain
11Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits
11Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit
3912Citrate synthase, C-terminal domain
61218GHMP kinases N terminal domain
51318Biotin carboxylase, N-terminal domain
11Tryptophan synthase alpha chain
81119Pyridoxal-phosphate dependent enzyme
152540NUDIX domain
101323pfkB family carbohydrate kinase
123Glycosyl hydrolases family 28
246Ribosomal protein L3
347Ribosomal protein L11, RNA binding domain
101626Histidine phosphatase superfamily (branch 1)
325Rubredoxin
123Thymidylate synthase
11415ATP synthase alpha/beta chain, C terminal domain
31720Calponin homology (CH) domain
134Glutamine amidotransferases class-II
279Phosphoenolpyruvate carboxylase
224Ribosomal protein S15
123'Cold-shock' DNA-binding domain
5712Fructose-1-6-bisphosphatase, N-terminal domain
33Ribonucleotide reductase, all-alpha domain
55Ribosomal protein S2
11SRF-type transcription factor (DNA-binding and dimerisation domain)
156GATA zinc finger
81018Prolyl oligopeptidase family
123Ribosomal protein L30p/L7e
51015Histidine phosphatase superfamily (branch 2)
11Respiratory-chain NADH dehydrogenase, 30 Kd subunit
437Aconitase family (aconitate hydratase)
44Glycosyl hydrolase family 10
235Ribosomal protein S5, N-terminal domain
4812Nucleoside diphosphate kinase
156Tetraspanin family
235Ribosomal protein S10p/S20e
347Phosphoglucose isomerase
5611Carbohydrate phosphorylase
145SecY translocase
55Respiratory-chain NADH dehydrogenase, 49 Kd subunit
235Ribosomal protein L6
4610Polyprenyl synthetase
11Hexokinase
62531Dynamin family
112Biopterin-dependent aromatic amino acid hydroxylase
224Transcription factor TFIID (or TATA-binding protein, TBP)
11011RTX calcium-binding nonapeptide repeat (4 copies)
51924Rieske [2Fe-2S] domain
279Phytochrome region
44Proton-conducting membrane transporter
112Integrin beta chain VWA domain
102434Biotin-requiring enzyme
358Phosphofructokinase
224Ribosomal protein S17
224Hydroxymethylglutaryl-coenzyme A reductase
246FGGY family of carbohydrate kinases, N-terminal domain
123FERM central domain
11Sodium:dicarboxylate symporter family
51318Enoyl-CoA hydratase/isomerase
167Ribosomal protein S9/S16
224Transcription factor TFIIB repeat
51217Cytidine and deoxycytidylate deaminase zinc-binding region
123Molybdopterin oxidoreductase
31417Chromo (CHRromatin Organisation MOdifier) domain
11C1q domain
11Phosphatidylinositol-specific phospholipase C, Y domain
11Phosphatidylinositol-specific phospholipase C, X domain
4610D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
167Malic enzyme, N-terminal domain
235PEP-utilising enzyme, mobile domain
336-phosphogluconate dehydrogenase, C-terminal domain
3710Multicopper oxidase
112Granulin
143751WW domain
246Ribosomal RNA adenine dimethylase
146333479WD domain, G-beta repeat
11ATP synthase, Delta/Epsilon chain, long alpha-helix domain
51621Heavy-metal-associated domain
336Transferrin
81927Adenylate kinase
358Phosphoglucomutase/phosphomannomutase, C-terminal domain
22Ribosomal protein S8
145Ribosomal protein S11
369LIM domain
123547Regulator of chromosome condensation (RCC1) repeat
134Ribosomal protein S13/S18
11Tau and MAP protein, tubulin-binding repeat
55Photosystem II protein
134chorismate binding enzyme
21360s Acidic ribosomal protein
358ATP synthase B/B' CF(0)
358Prenyltransferase and squalene oxidase repeat
224Protein kinase C terminal domain
112Single-strand binding protein family
11Type II/IV secretion system protein
112S-adenosylmethionine synthetase, N-terminal domain
61622Bromodomain
4812Acyl-CoA dehydrogenase, C-terminal domain
114960Ubiquitin carboxyl-terminal hydrolase
11Ribosomal protein L36
325HSF-type DNA-binding
3710SRP54-type protein, GTPase domain
123Serine carboxypeptidase
123Ribosomal protein L20
61117Phosphatidylinositol 3- and 4-kinase
347Transketolase, thiamine diphosphate binding domain
134WHEP-TRS domain
61319Inositol monophosphatase family
152237Glutaredoxin
123Isocitrate lyase family
347Serine hydroxymethyltransferase
112Iron-containing alcohol dehydrogenase
358Ribosomal protein L10
41014KOW motif
22Ribosomal protein L34
6915RF-1 domain
336Sodium:solute symporter family
112Imidazoleglycerol-phosphate dehydratase
268DNA polymerase family A
11IMP dehydrogenase / GMP reductase domain
336Glucose-6-phosphate dehydrogenase, NAD binding domain
246ROK family
203959Protein phosphatase 2C
7916Nucleotidyl transferase
336Carbonic anhydrase
6814Phosphoribulokinase / Uridine kinase family
22Transcriptional regulatory protein, C terminal
61218Fatty acid desaturase
21820MutS domain V
123Delta-aminolevulinic acid dehydratase
51318MCM P-loop domain
246Squalene/phytoene synthase
189Bacterial extracellular solute-binding proteins, family 3
102333FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
2893121AMP-binding enzyme
11G-protein alpha subunit
233356Chlorophyll A-B binding protein
6915HMG (high mobility group) box
2585110His Kinase A (phospho-acceptor) domain
82230Armadillo/beta-catenin-like repeat
143650Tetratricopeptide repeat
3389122Ion transport protein
268DNA gyrase/topoisomerase IV, subunit A
123Dictyostelium (slime mold) repeat
112Binding-protein-dependent transport system inner membrane component
22HlyD membrane-fusion protein of T1SS
31316BRCA1 C Terminus (BRCT) domain
123143Glycosyl transferases group 1
72532Glycosyl transferase family 2
4913SAM domain (Sterile alpha motif)
134linker histone H1 and H5 family
134Ribosomal protein L7/L12 C-terminal domain
224Nitrogen regulatory protein P-II
156CoA-ligase
65561Phosphopantetheine attachment site
21012Formyl transferase
71623Metallopeptidase family M24
226486Leucine Rich Repeat
5712alpha/beta hydrolase fold
11011RNA polymerase Rpb2, domain 6
21618PB1 domain
3030Staphylococcal nuclease homologue
71724Rab-GTPase-TBC domain
11Tudor domain
61824Zinc finger, ZZ type
358HRDC domain
143448CBS domain
235Ribosomal protein L13
347Ribosomal protein L4/L1 family
81018Clp protease
71825S1 RNA binding domain
112HIUase/Transthyretin family
6713AhpC/TSA family
41014tRNA synthetases class I (W and Y)
31518UvrD/REP helicase N-terminal domain
121931Rhodanese-like domain
347Universal stress protein family
172441Acetyltransferase (GNAT) family
112SecE/Sec61-gamma subunits of protein translocation complex
213C-terminal regulatory domain of Threonine dehydratase
336AIR synthase related protein, N-terminal domain
51015tRNA synthetase class II core domain (G, H, P, S and T)
9918SpoU rRNA Methylase family
1414Phage integrase family
235Tetrapyrrole (Corrin/Porphyrin) Methylases
112Glycosyl transferase family, a/b domain
5914PDZ domain
145Class II Aldolase and Adducin N-terminal domain
156Diacylglycerol kinase accessory domain
134Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
245781IQ calmodulin-binding motif
156Phosphoinositide 3-kinase family, accessory domain (PIK domain)
358Phospholipase D Active site motif
31316RhoGAP domain
51015SPRY domain
21012RNA polymerase Rpb1, domain 2
257Guanylate kinase
5611Gelsolin repeat
91928UBA/TS-N domain
144862PHD-finger
93140Filamin/ABP280 repeat
195372HECT-domain (ubiquitin-transferase)
123Helix-hairpin-helix motif
22MSP (Major sperm protein) domain
347Ribonuclease III domain
145Region in Clathrin and VPS
123RanBP1 domain
325PPIC-type PPIASE domain
41115Zn-finger in Ran binding protein and others
102939Zinc finger C-x8-C-x5-C-x3-H type (and similar)
4711B-box zinc finger
43034Poly(ADP-ribose) polymerase catalytic domain
11Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
43236F-box domain
41014Calpain family cysteine protease
51015CRAL/TRIO domain
51217BTB/POZ domain
11Inhibitor of Apoptosis domain
167Voltage gated chloride channel
246Caspase domain
279GDSL-like Lipase/Acylhydrolase
123Poly-adenylate binding protein, unique domain
112POLO box duplicated region
11NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
184462ABC transporter transmembrane region
99Integrase core domain
5914FAD binding domain
64753Condensation domain
22S-adenosyl-L-homocysteine hydrolase, NAD binding domain
11HAMP domain
77ribosomal L5P family C-terminus
81119Insulinase (Peptidase family M16)
2911Dehydrogenase E1 component
112Lumazine binding domain
81826Elongation factor G C-terminus
369HMGL-like
44DnaJ central domain
91423Sulfotransferase domain
21416Starch binding domain
358Ribosomal protein L1p/L10e family
3710Cation transporting ATPase, C-terminus
51318Cation transporter/ATPase, N-terminus
213dUTPase
336Aconitase C-terminal domain
71219Amino acid kinase family
11N-(5'phosphoribosyl)anthranilate (PRA) isomerase
66Acyl transferase domain
134Dihydrodipicolinate synthetase family
124052haloacid dehalogenase-like hydrolase
11Glycosyl hydrolases family 18
6105111Proliferating cell nuclear antigen, N-terminal domain
235Translation initiation factor IF-3, C-terminal domain
224Acylphosphatase
123Adenylosuccinate synthetase
112Asparaginase, N-terminal
33Peptidase S24-like
336Inorganic pyrophosphatase
112Glycosyl hydrolases family 16
112NADH:flavin oxidoreductase / NADH oxidase family
3363-hydroxyacyl-CoA dehydrogenase, C-terminal domain
224Glycosyl hydrolase family 20, catalytic domain
347HhH-GPD superfamily base excision DNA repair protein
145AIR carboxylase
224GMC oxidoreductase
3710Asparagine synthase
145Septin
123Homoserine dehydrogenase
224Flavin-binding monooxygenase-like
112Glutamyl-tRNAGlu reductase, dimerisation domain
268tRNA synthetases class I (E and Q), catalytic domain
44tRNA synthetases class I (R)
268XPG N-terminal domain
101929Metallo-beta-lactamase superfamily
224Putative esterase
213Ferrochelatase
167Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
112Arginosuccinate synthase
112Electron transfer flavoprotein FAD-binding domain
11D-alanyl-D-alanine carboxypeptidase
11112RNB domain
91262353Glycosyltransferase family 29 (sialyltransferase)
112BTK motif
77CNH domain
2810Diacylglycerol kinase catalytic domain
112435Dual specificity phosphatase, catalytic domain
268MyTH4 domain
41317PX domain
51217UBX domain
145VHS domain
22Phosphoinositide 3-kinase C2
112DAHP synthetase I family
11PI3-kinase family, ras-binding domain
4812Carbon-nitrogen hydrolase
44Syntaxin
325Pentapeptide repeats (8 copies)
123Pumilio-family RNA binding repeat
459Histone-like transcription factor (CBF/NF-Y) and archaeal histone
235Pterin binding enzyme
235ER lumen protein retaining receptor
235tRNA N6-adenosine threonylcarbamoyltransferase
112Histidinol dehydrogenase
268impB/mucB/samB family
123Phosphoenolpyruvate carboxykinase C-terminal P-loop domain
112Ribosomal L15
257Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
145Ribosomal prokaryotic L21 protein
213Ribosomal L28 family
224Ribosomal L29 protein
11Ribosomal L39 protein
11Ribosomal S17
112Ribulose-phosphate 3 epimerase family
224Cysteine rich repeat
52429AP2 domain
61016RNA pseudouridylate synthase
51318Histone deacetylase domain
2424Glycosyltransferase family 10 (fucosyltransferase) C-term
134POT family
257PWWP domain
2595120SET domain
235Isochorismatase family
235Amiloride-sensitive sodium channel
279Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
112Sucrose synthase
22ATP P2X receptor
2810XPG I-region
41317DNA photolyase
112NlpC/P60 family
11Nitroreductase family
123Cytosol aminopeptidase family, catalytic domain
145Sulfatase
2136,7-dimethyl-8-ribityllumazine synthase
123Ribosomal protein S16
224Acyl CoA binding protein
459Cullin family
235Elongation factor TS
41519FAD binding domain
123O-methyltransferase domain
133245EamA-like transporter family
71320ThiF family
112Ribosomal family S4e
112Sec-independent protein translocase protein (TatC)
347Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
21012Penicillin binding protein transpeptidase domain
132841Ammonium Transporter Family
2911Transglycosylase
112Sulfate permease family
72027MATH domain
156Uncharacterized protein family UPF0004
213Dehydratase family
448Transaldolase/Fructose-6-phosphate aldolase
5813Mechanosensitive ion channel
11GTP cyclohydrolase II
113,4-dihydroxy-2-butanone 4-phosphate synthase
31013Adaptor complexes medium subunit family
51318Exonuclease
112Dipeptidyl peptidase IV (DPP IV) N-terminal region
11NB-ARC domain
246Glycosyl hydrolase family 3 N terminal domain
112Ribosomal protein L44
6713Sodium:sulfate symporter transmembrane region
11DNA-dependent RNA polymerase
257FAD binding domain in molybdopterin dehydrogenase
134Glycosyl transferase family 4
325HCO3- transporter family
156Nucleosome assembly protein (NAP)
369Synaptobrevin
112GMP synthase C terminal domain
224Adenosine/AMP deaminase
268Oxidoreductase FAD-binding domain
246Thioesterase domain
224Histidine biosynthesis protein
336Glycosyltransferase family 20
156UDP-glucose/GDP-mannose dehydrogenase family, central domain
213DNA gyrase B subunit, carboxyl terminus
11Carbamoyl-phosphate synthase small chain, CPSase domain
92433PAS fold
11Diguanylate cyclase, GGDEF domain
134Probable molybdopterin binding domain
459Sec1 family
134GDP dissociation inhibitor
62632Sodium/hydrogen exchanger family
156RNA polymerase Rpb3/RpoA insert domain
112Inward rectifier potassium channel transmembrane domain
369Initiation factor 2 subunit family
11NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus
123Electron transfer flavoprotein domain
11Uricase
22Ribosomal S3Ae family
224Ribosomal L27 protein
55GTP1/OBG
11Gamma-glutamyltranspeptidase
112Ribosomal L40e family
347GrpE
257TatD related DNase
246Inhibitor of apoptosis-promoting Bax1
123Eukaryotic DNA topoisomerase I, catalytic core
112NusB family
21214Dynamin central region
1910Bacteriorhodopsin-like protein
41519Carboxyl transferase domain
71017UbiA prenyltransferase family
11DegT/DnrJ/EryC1/StrS aminotransferase family
235Endoribonuclease L-PSP
66SecA preprotein cross-linking domain
22Phosphorylase superfamily
246Cys/Met metabolism PLP-dependent enzyme
61016Glycosyl hydrolases family 31
112NADH ubiquinone oxidoreductase, 20 Kd subunit
173754ABC-2 type transporter
71724Bestrophin, RFP-TM, chloride channel
5914Amino-transferase class IV
5510CDP-alcohol phosphatidyltransferase
123Calpain large subunit, domain III
178ATP dependent DNA ligase domain
123FMN-dependent dehydrogenase
112Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
2463-beta hydroxysteroid dehydrogenase/isomerase family
145Glycosyl hydrolases family 38 N-terminal domain
224Nitrite and sulphite reductase 4Fe-4S domain
44Magnesium chelatase, subunit ChlI
224Hint module
33Presenilin
11Copper type II ascorbate-dependent monooxygenase, N-terminal domain
112Ribosomal protein S18
134Clathrin light chain
246Ubiquitin carboxyl-terminal hydrolase, family 1
11Ribosomal protein S19e
11Ribosomal protein S6e
61521Receptor family ligand binding region
224Transcription factor S-II (TFIIS)
369Omp85 superfamily domain
134emp24/gp25L/p24 family/GOLD
257NifU-like domain
11Cyclin-dependent kinase regulatory subunit
123Asparaginase
123Dihydrodipicolinate reductase, N-terminus
112F-actin capping protein, beta subunit
134Fructose-bisphosphate aldolase class-II
156Semialdehyde dehydrogenase, NAD binding domain
189DNA mismatch repair protein, C-terminal domain
11Alpha-L-fucosidase
123Dephospho-CoA kinase
123MAPEG family
11G10 protein
11Heme oxygenase
112-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
145CD36 family
6713DNA topoisomerase
134Elongation factor P (EF-P) OB domain
347Glucose inhibited division protein A
33Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
112RNA 3'-terminal phosphate cyclase
39123' exoribonuclease family, domain 1
66tRNA-splicing ligase RtcB
44tRNA pseudouridine synthase D (TruD)
22Coenzyme A transferase
3912SPFH domain / Band 7 family
268Cytidylyltransferase family
123Formamidopyrimidine-DNA glycosylase N-terminal domain
358GDA1/CD39 (nucleoside phosphatase) family
246GNS1/SUR4 family
224Bacterial-like globin
11Hydroxymethylglutaryl-coenzyme A synthase N terminal
437Inosine-uridine preferring nucleoside hydrolase
112Ribosomal protein L21e
112Ribosomal protein L36e
112Ribosomal protein L6e
11Phosphatidylethanolamine-binding protein
167RIO1 family
11Ribosomal protein S21
336Tub family
224Alanine racemase, N-terminal domain
41014Uncharacterized protein family UPF0016
279Putative RNA methylase family UPF0020
235PP-loop family
112Shwachman-Bodian-Diamond syndrome (SBDS) protein
112SNO glutamine amidotransferase family
145Translation initiation factor 1A / IF-1
112Asp/Glu/Hydantoin racemase
235Copper amine oxidase, enzyme domain
224Dihydroorotate dehydrogenase
11Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
44Lysyl oxidase
112Macrophage migration inhibitory factor (MIF)
134
6142016S rRNA methyltransferase RsmB/F
123RNA polymerase Rpb5, C-terminal domain
112RNA polymerase Rpb6
156RNA polymerase Rpb3/Rpb11 dimerisation domain
11RNA polymerases N / 8 kDa subunit
224Peptidyl-tRNA hydrolase
112Ribosomal protein L17
112Ribosomal protein L31
11Ribosomal protein L31e
11Ribosomal protein L34e
224Ribosomal protein S8e
213Shikimate kinase
33Trehalase
167Uncharacterized protein family UPF0029
51217Dihydrouridine synthase (Dus)
347Uroporphyrinogen decarboxylase (URO-D)
358ubiE/COQ5 methyltransferase family
235NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
123Beta-eliminating lyase
112Adenylate cyclase associated (CAP) N terminal
112Casein kinase II regulatory subunit
112Cytochrome c oxidase subunit Vb
6915Clathrin adaptor complex small chain
224Coproporphyrinogen III oxidase
224Dynein light chain type 1
11Ergosterol biosynthesis ERG4/ERG24 family
167Mur ligase family, catalytic domain
11Formate/nitrite transporter
112GTP cyclohydrolase I
5611HIT domain
11Indoleamine 2,3-dioxygenase
11Mannitol dehydrogenase Rossmann domain
112Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain
11Sodium:alanine symporter family
268Oxysterol-binding protein
11Phosphomannose isomerase type I
123Protein prenyltransferase alpha subunit repeat
336Photosystem I psaG / psaK
116-pyruvoyl tetrahydropterin synthase
22Pyridoxamine 5'-phosphate oxidase
11Ribosomal protein L19
213Ribosomal protein L24e
11Ribosomal protein L35Ae
369Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
11Ribosomal protein S21e
134Ribosomal protein S6
123Ribosomal protein S7e
11Signal peptidase (SPase) II
325Translation initiation factor SUI1
235Putative undecaprenyl diphosphate synthase
134Carbohydrate kinase
112Thioredoxin-like [2Fe-2S] ferredoxin
112SAICAR synthetase
347Xylose isomerase-like TIM barrel
6915Alanine dehydrogenase/PNT, C-terminal domain
347Aldose 1-epimerase
11Chorismate synthase
112Cytochrome c/c1 heme lyase
71724FAD dependent oxidoreductase
112F-actin capping protein alpha subunit
112Fibrillarin
11Transcription elongation factor, GreA/GreB, C-term
112LBP / BPI / CETP family, N-terminal domain
112Malate synthase
112Ribosomal protein L19e
123Ribosomal protein L9, N-terminal domain
112Ribosomal protein S24e
112Ribosomal protein S26e
112Membrane-associating domain
112Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold
1237,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
369Phosphoenolpyruvate carboxykinase
11Ribosomal protein L13e
11Zinc-uptake complex component A periplasmic
134Telomere recombination
22Glycosyl hydrolases family 35
358CAP-Gly domain
257Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
134Creatinase/Prolidase N-terminal domain
112DSBA-like thioredoxin domain
41418Pyruvate phosphate dikinase, PEP/pyruvate binding domain
257Polypeptide deformylase
224Pterin 4 alpha carbinolamine dehydratase
1111mRNA capping enzyme, catalytic domain
71724OB-fold nucleic acid binding domain
123Peptidase family S49
279Kelch motif
145Ribonuclease HII
3811FYVE zinc finger
41115RIH domain
1345'-3' exonuclease, C-terminal SAM fold
112DHH family
347Sec7 domain
153045NAD dependent epimerase/dehydratase family
235Glycosyl hydrolase family 14
123Porphobilinogen deaminase, dipyromethane cofactor binding domain
3811SIS domain
123Helix-turn-helix
31114Phosphate transporter family
123Ribosomal L25p family
66ARID/BRIGHT DNA binding domain
437Collagen triple helix repeat (20 copies)
112Clathrin propeller repeat
246Topoisomerase DNA binding C4 zinc finger
61117JAB1/Mov34/MPN/PAD-1 ubiquitin protease
71421PCI domain
336tRNA synthetases class I (C) catalytic domain
268Oxidoreductase family, NAD-binding Rossmann fold
134tRNA synthetases class II core domain (F)
77tRNA synthetases class II (A)
4913Putative GTPase activating protein for Arf
41014tRNA pseudouridine synthase
156ENTH domain
134NF-X1 type zinc finger
11920LSM domain
5611R3H domain
4812Amidase
257BAH domain
112D-ala-D-ala dipeptidase
213AN1-like Zinc finger
112Hsp33 protein
21315Peptidase family M3
4610Peptidase family M1 domain
142640Peptidase family M41
257Peptidase family M48
112NHL repeat
112Apolipoprotein A1/A4/E domain
123Acetohydroxy acid isomeroreductase, catalytic domain
257Low molecular weight phosphotyrosine protein phosphatase
11MAGE family
42226Leishmanolysin
224Uncharacterized protein family (UPF0051)
235Eukaryotic porin
358Transglycosylase SLT domain
178GRIP domain
224Skp1 family, dimerisation domain
2911Cytidylyltransferase-like
22Pyroglutamyl peptidase
4711Putative peptidoglycan binding domain
123PUA domain
123Class-II DAHP synthetase family
1795112LysM domain
369PLAT/LH2 domain
7815S4 domain
123PWI domain
31013IBR domain, a half RING-finger domain
112Type I 3-dehydroquinase
213Shikimate / quinate 5-dehydrogenase
61016Transmembrane amino acid transporter protein
134Frataxin-like domain
235GXGXG motif
81826FAD binding domain
112V-type ATPase 116kDa subunit family
11Periplasmic binding protein
61117Glycosyl transferase family 8
112Phosphoribosyl-AMP cyclohydrolase
112Phosphoribosyl-ATP pyrophosphohydrolase
224Phosphatidylinositol-4-phosphate 5-Kinase
134Phosphoadenosine phosphosulfate reductase family
224TruB family pseudouridylate synthase (N terminal domain)
123N-acetylmuramoyl-L-alanine amidase
112Respiratory-chain NADH dehydrogenase 51 Kd subunit
31013ATP-NAD kinase
11N-acetylmuramoyl-L-alanine amidase
235Iron-sulphur cluster biosynthesis
11Transposase
61824DHHC palmitoyltransferase
369Glycosyl hydrolase family 47
144559PPR repeat
112Adenosylmethionine decarboxylase
112GIY-YIG catalytic domain
3710CorA-like Mg2+ transporter protein
358Cation efflux family
3710Peptidase family M20/M25/M40
31518ShK domain-like
71017Peptidase family M23
112031Acyltransferase
41115MatE
6713DnaJ C terminal domain
213Fumarylacetoacetate (FAA) hydrolase family
112Pyruvate ferredoxin/flavodoxin oxidoreductase
134Spermine/spermidine synthase domain
51924FAD binding domain
3710Natural resistance-associated macrophage protein
268PAP2 superfamily
347Aminomethyltransferase folate-binding domain
134MaoC like domain
11FtsK/SpoIIIE family
11Adenylylsulphate kinase
71219G-patch domain
3710Putative tRNA binding domain
162844GAF domain
1236-phosphofructo-2-kinase
123NifU-like N terminal domain
91524Flavin containing amine oxidoreductase
235AI-2E family transporter
41014Cyclin M transmembrane N-terminal domain
112O-methyltransferase
112Glycine cleavage H-protein
11Ribosomal protein S27a
71017Adaptin N terminal region
112Protein phosphatase 2A regulatory B subunit (B56 family)
820283'-5' exonuclease
4711Flavin reductase like domain
112Proline dehydrogenase
21113MutS domain I
246Peptide methionine sulfoxide reductase
112Hpt domain
112Ribosomal protein L35
325Choline/ethanolamine kinase
224ATP phosphoribosyltransferase
167Phosphotransferase enzyme family
5510SelR domain
213Methylmalonyl-CoA mutase
112Acyl-ACP thioesterase
235Conserved region in glutamate synthase
2354'-phosphopantetheinyl transferase superfamily
11Ribosomal protein S20
134Peptidase C13 family
112Eukaryotic initiation factor 4E
11NAD-dependent DNA ligase adenylation domain
11Ribosomal protein L32
133447CobQ/CobB/MinD/ParA nucleotide binding domain
112Myo-inositol-1-phosphate synthase
112Macro domain
178Type I phosphodiesterase / nucleotide pyrophosphatase
11Ribosomal protein S27
112SmpB protein
145Metalloenzyme superfamily
112Diaminopimelate epimerase
11Proteolipid membrane potential modulator
11SOR/SNZ family
11EB module
178Riboflavin kinase
145Caulimovirus viroplasmin
71825Rhomboid family
22Glycosyltransferase family 92
4812Sodium/calcium exchanger protein
224Queuine tRNA-ribosyltransferase
3710UTP--glucose-1-phosphate uridylyltransferase
123Transcriptional regulator
11Deoxynucleoside kinase
22Smr domain
257IPP transferase
134Manganese-stabilising protein / photosystem II polypeptide
448BolA-like protein
33Ham1 family
3710FtsJ-like methyltransferase
112Quinolinate phosphoribosyl transferase, C-terminal domain
279Nucleoside transporter
2810Patatin-like phospholipase
44Dienelactone hydrolase family
112STAS domain
4610Poly A polymerase head domain
112tRNA (Guanine-1)-methyltransferase
123ATP-sulfurylase
112Importin beta binding domain
5914Toprim domain
24112136MYND finger
11A20-like zinc finger
235Glycosyltransferase family 25 (LPS biosynthesis protein)
145Acyl-CoA oxidase
145Acyltransferase family
235Sodium Bile acid symporter family
113-dehydroquinate synthase
167Galactosyltransferase
43034Lipase (class 3)
33Ribosome recycling factor
123Divalent cation transporter
112Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
112Ribosomal L22e protein family
112Ribosomal L27e protein family
268Ribosomal L28e protein family
11Ribosomal L37ae protein family
11Ribosomal L38e protein family
11RimM N-terminal domain
112Ribosomal L32p protein family
235Alternative oxidase
7815PsbP
11DeoC/LacD family aldolase
123Glycolipid 2-alpha-mannosyltransferase
178Ferric reductase like transmembrane component
123MraW methylase family
369snoRNA binding domain, fibrillarin
257[2Fe-2S] binding domain
11LIM-domain binding protein
123Penicillin amidase
369Surp module
112AICARFT/IMPCHase bienzyme
22Putative membrane protein insertion efficiency factor
2135-formyltetrahydrofolate cyclo-ligase family
112ATP synthase subunit D
2911Hemerythrin HHE cation binding domain
123D-ala D-ala ligase N-terminus
178MAC/Perforin domain
134GPCR proteolysis site, GPS, motif
112Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
151732IPT/TIG domain
11FG-GAP repeat
22Transglutaminase-like superfamily
6915ACT domain
31013DIL domain
257HNH endonuclease
178FF domain
33VHL beta domain
224NAC domain
55Proteasome/cyclosome repeat
358START domain
224MOZ/SAS family
112Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
123Retinoblastoma-associated protein B domain
123Retinoblastoma-associated protein A domain
11Protein of unknown function DUF45
246Putative diphthamide synthesis protein
112Domain of unknown function UPF0086
314BadF/BadG/BcrA/BcrD ATPase family
123RibD C-terminal domain
123Domain found in IF2B/IF5
112Memo-like protein
22RNase P subunit p30
112EVE domain
224Iron-sulfur cluster assembly protein
112RNA 2'-phosphotransferase, Tpt1 / KptA family
112Uncharacterised protein family UPF0047
11DNA primase small subunit
11Rpp14/Pop5 family
235Diphthamide synthase
112CbiX
51015Nucleotidyltransferase domain
213eIF-6 family
22Glycosyl hydrolase family 3 C-terminal domain
112Deoxyhypusine synthase
224Alba
347Prefoldin subunit
11tRNA synthetases class I (K)
112SRP19 protein
1818Cobalamin adenosyltransferase
156Sulfite exporter TauE/SafE
20375750S ribosome-binding GTPase
123CYTH domain
112Ribosomal protein L14
112Uncharacterised protein family UPF0052
178NYN domain
145Protein of unknown function DUF89
134TRAM domain
224Integral membrane protein DUF92
213Thi4 family
11p-hydroxybenzoic acid synthase
22Archease protein family (MTH1598/TM1083)
123Integral membrane protein EMC3/TMCO1-like
113-dehydroquinate synthase II
112ArgJ family
4610TraB family
123Radical SAM ThiC family
6713DJ-1/PfpI family
235HD domain
112MoaC family
66Hydantoinase/oxoprolinase
224Protein of unknown function DUF111
33tRNA intron endonuclease, catalytic C-terminal domain
123Survival protein SurE
113-octaprenyl-4-hydroxybenzoate carboxy-lyase
178Amidohydrolase family
123tRNA-methyltransferase O
325Peptidyl-tRNA hydrolase PTH2
112Double-stranded DNA-binding domain
112Mitochondrial biogenesis AIM24
22VIT family
11ATP synthase (F/14-kDa) subunit
112ATP synthase (E/31 kDa) subunit
112ATP synthase (C/AC39) subunit
123F420-0:Gamma-glutamyl ligase
123Translin family
11TFIIE alpha subunit
235N2,N2-dimethylguanosine tRNA methyltransferase
31619REJ domain
22Reeler domain
123LD-carboxypeptidase N-terminal domain
134Carbohydrate binding domain
55eIF4-gamma/eIF5/eIF2-epsilon
224Ribosome-binding factor A
112SCP-2 sterol transfer family
41317SAP domain
11011RWP-RK domain
112CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
112Cytochrome c oxidase subunit VIa
257Melibiase
22Carboxypeptidase Taq (M32) metallopeptidase
5712TrkA-C domain
112Palmitoyl protein thioesterase
22Glycyl-tRNA synthetase alpha subunit
22Glycyl-tRNA synthetase beta subunit
4460Kd inner membrane protein
123Josephin
11SURF1 family
11DAD family
11Phosducin
11RHO protein GDP dissociation inhibitor
224Phosphatidylinositol transfer protein
224Aminopeptidase I zinc metalloprotease (M18)