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This genome was sequenced as part of the JGI CSP "1000
Fungal Genomes - Deep Sequencing of Ecologically-relevant
Dikarya" project. Within the framework of this project, we are
sequencing keystone lineages of saprophytic, mycorrhizal, and
endophytic fungi that are of special ecological importance. Dozens
of sequenced species were harvested from Long Term Observatories to
serve as the foundation for a reference database for metagenomics
of fungi and for a comprehensive survey of the soil fungal
metatranscriptome.
Radulomyces confluens
OMC1631
Radulomyces confluens is a wide-spread wood-inhabiting
fungus with effused and smooth (corticioid) fruiting bodies. The
species is very common in temperate Europe, where it inhabits
mostly dead deciduous wood in parks and forests. Its distribution
extends to North America and Asia (Ginns & Lefevbre 1993,
Ghobad-Nejhad & Kotiranta 2007). Radulomyces confluens
is apparently a white-rotter, though its decay capability has not
been studied in detail.
Radulomyces confluens belongs to the family Pterulaceae
in Agaricales, Basidiomycota (Larsson 2007). It is among the few
corticioid fungi that have been genome-sequenced from this order,
which is otherwise dominated by agarics. The other sequenced
corticioid fungi as of 2018 are Aphanobasidium pseudotsugae
(Pterulaceae), Cylindrobasidium
torrendii (Physalacriaceae), Cystostereum murrayi (Cystostereaceae),
and Dendrothele bispora
(Marasmiaceae).
The genome is based on a single-spore isolate from Helsinki,
Finland.
The 1KFG project is a large collaborative effort aiming for master
publication(s). Please do contact the PI for 1KFG - Deep Sequencing
of Ecologically-relevant Dikarya (Dr. Francis Martin) for
permission prior to the use of any data in publications.
References
- Ghobad-Nejhad M, Kotiranta H (2007) Re-evaluation of Radulomyces rickii and notes on Radulomyces and Phlebiella (Basidiomycota). Mycotaxon 102:101-111
- Ginns J, Lefebvre MNL (1993) Lignicolous corticioid fungi (Basidiomycota) of North America vol 19. Mycological Memoir. APS Press, St. Paul, Minnesota
- Larsson K-H (2007) Re-thinking the classification of corticioid fungi. Mycol Res 111 (9):1040-1063. doi:10.1016/j.mycres.2007.08.001