Status
This genome was sequenced by The Josephine Bay Paul Center for Comparative Molecular Biology and Evolution at the Marine Biological Laboratory, Woods Hole, MA. Please check their data use policies.
Summary statistics for the Antonospora locustae HM-2013
v1.0 release are below.
| Genome Assembly | |
| Genome Assembly size (Mbp) | 6.07 |
| Sequencing read coverage depth | 7.9x |
| # of contigs | 3116 |
| # of scaffolds | 3116 |
| # of scaffolds >= 2Kbp | 418 |
| Scaffold N50 | 353 |
| Scaffold L50 (Mbp) | 0.00 |
| # of gaps | 0 |
| % of scaffold length in gaps | 0.0% |
| Three largest Scaffolds (Mbp) | 0.07, 0.06, 0.06 |
| Gene Models | ExternalModels | |
| length (bp) of: | average | median |
| gene | 699 | 525 |
| transcript | 699 | 525 |
| exon | 699 | 525 |
| intron | n/a | 0 |
| description: | ||
| protein length (aa) | 233 | 175 |
| exons per gene | 1.00 | 1 |
| # of gene models | 2606 |
Genome Reference(s)
Please cite the following publication(s) if you use the data from this genome in your research:
Slamovits CH, Fast NM, Law JS, Keeling PJ
Genome compaction and stability in microsporidian intracellular parasites.
Curr Biol. 2004 May 25;14(10):891-6. doi: 10.1016/j.cub.2004.04.041
Corradi N, Akiyoshi DE, Morrison HG, Feng X, Weiss LM, Tzipori S, Keeling PJ
Patterns of genome evolution among the microsporidian parasites Encephalitozoon cuniculi, Antonospora locustae and Enterocytozoon bieneusi.
PLoS One. 2007 Dec 5;2(12):e1277. doi: 10.1371/journal.pone.0001277
Slamovits CH, Fast NM, Law JS, Keeling PJ
Genome compaction and stability in microsporidian intracellular parasites.
Curr Biol. 2004 May 25;14(10):891-6. doi: 10.1016/j.cub.2004.04.041
Corradi N, Akiyoshi DE, Morrison HG, Feng X, Weiss LM, Tzipori S, Keeling PJ
Patterns of genome evolution among the microsporidian parasites Encephalitozoon cuniculi, Antonospora locustae and Enterocytozoon bieneusi.
PLoS One. 2007 Dec 5;2(12):e1277. doi: 10.1371/journal.pone.0001277
Funding
This project was not sequenced at the JGI.
