Info • Ascochyta rabiei ArDII


The genome sequence and gene prediction of Ascochyta rabiei ArDII have not been determined by the JGI, but were downloaded from NCBI on June 1, 2017. In order to allow comparative analyses with other fungal genomes sequenced by the Joint Genome Institute, a copy of this genome is incorporated into Mycocosm. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated.

Assembly Method :: ABySS v. 1.3.5
Sequencing Technology :: Illumina HiSeq


Summary statistics for the Ascochyta rabiei release are below.
Genome Assembly
Genome Assembly size (Mbp) 34.66
Sequencing read coverage depth
# of contigs 860
# of scaffolds 338
# of scaffolds >= 2Kbp 338
Scaffold N50 64
Scaffold L50 (Mbp) 0.15
# of gaps 522
% of scaffold length in gaps 1.8%
Three largest Scaffolds (Mbp) 1.16, 0.74, 0.60

Gene Models ExternalModels
length (bp) of: average median
gene 1727 1395
transcript 1535 1275
exon 558 318
intron 112 56
protein length (aa) 512 425
exons per gene 2.75 2
# of gene models 10596

Genome Reference(s)


This project was not sequenced at the JGI.