Info • Aspergillus aureoterreus v1.0

Status

[October 2016] The Aspergillus aureoterreus CBS 503.65 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline.

Summary statistics for the Aspergillus aureoterreus v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 29.52
Sequencing read coverage depth 95x
# of contigs 124
# of scaffolds 109
# of scaffolds >= 2Kbp 98
Scaffold N50 15
Scaffold L50 (Mbp) 0.76
# of gaps 15
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.93, 1.30, 1.29


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 24757 24352 98.4%
Ests est.fasta 34484824 34244886 99.3%


Gene Models FilteredModels1
length (bp) of: average median
gene 1823 1581
transcript 1656 1426
exon 520 310
intron 79 59
description:
protein length (aa) 470 395
exons per gene 3.18 3
# of gene models 11269


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.