Info • Aspergillus aurantiobrunneus CBS 465.65 v1.0

Status

[May 2016] The Aspergillus aurantiobrunneus CBS 465.65 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus aurantiobrunneus v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 31.38
Sequencing read coverage depth 78x
# of contigs 330
# of scaffolds 278
# of scaffolds >= 2Kbp 250
Scaffold N50 36
Scaffold L50 (Mbp) 0.25
# of gaps 52
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.97, 0.76, 0.64


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 28791 27413 95.2%
Ests est.fasta 36579314 30563452 83.6%


Gene Models FilteredModels1
length (bp) of: average median
gene 1841 1596
transcript 1667 1438
exon 514 309
intron 80 60
description:
protein length (aa) 469 390
exons per gene 3.24 3
# of gene models 11287


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.