Info • Aspergillus aurantiopurpureus v1.0

Status

[April 2021] The Aspergillus aurantiopurpureus v1.0 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Genome Assembly
Genome Assembly size (Mbp) 32.79
Sequencing read coverage depth 97.4x
# of contigs 436
# of scaffolds 358
# of scaffolds >= 2Kbp 315
Scaffold N50 35
Scaffold L50 (Mbp) 0.25
# of gaps 78
% of scaffold length in gaps 0.2%
Three largest Scaffolds (Mbp) 1.27, 1.02, 0.91


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 44671 40566 90.8%
Ests est.fasta 197578722 196115590 99.3%


Gene Models FilteredModels1
length (bp) of: average median
gene 2010 1760
transcript 1835 1602
exon 560 339
intron 79 60
description:
protein length (aa) 488 406
exons per gene 3.28 3
# of gene models 11125


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.