Status
The genome sequence and gene models of Aspergillus bombycis NRRL 26010 have not been determined by the JGI, but were downloaded from NCBI on May 28, 2017. In order to allow comparative analyses with other fungal genomes sequenced by the Joint Genome Institute, a copy of this genome is incorporated into Mycocosm. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated.
Summary statistics for the Aspergillus bombycis NRRL 26010
release are below.
| Genome Assembly | |
| Genome Assembly size (Mbp) | 37.47 |
| Sequencing read coverage depth | |
| # of contigs | 450 |
| # of scaffolds | 450 |
| # of scaffolds >= 2Kbp | 316 |
| Scaffold N50 | 46 |
| Scaffold L50 (Mbp) | 0.24 |
| # of gaps | 0 |
| % of scaffold length in gaps | 0.0% |
| Three largest Scaffolds (Mbp) | 1.19, 1.18, 0.70 |
| Gene Models | ExternalModels | |
| length (bp) of: | average | median |
| gene | 1677 | 1421 |
| transcript | 1491 | 1263 |
| exon | 457 | 256 |
| intron | 84 | 62 |
| description: | ||
| protein length (aa) | 497 | 421 |
| exons per gene | 3.26 | 3 |
| # of gene models | 12265 |
Genome Reference(s)
Please cite the following publication(s) if you use the data from this genome in your research:
Moore GG, Mack BM, Beltz SB, Gilbert MK
Draft Genome Sequence of an Aflatoxigenic Aspergillus Species, A. bombycis.
Genome Biol Evol. 2016 Dec 14;8(11):3297-3300. doi: 10.1093/gbe/evw238
Moore GG, Mack BM, Beltz SB, Gilbert MK
Draft Genome Sequence of an Aflatoxigenic Aspergillus Species, A. bombycis.
Genome Biol Evol. 2016 Dec 14;8(11):3297-3300. doi: 10.1093/gbe/evw238
Funding
This project was not sequenced at the JGI.
