Info • Aspergillus chevalieri CBS 522.65 v1.0

Status

[May 2016] The Aspergillus chevalieri CBS 522.65 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus chevalieri v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 26.41
Sequencing read coverage depth 76.5x
# of contigs 454
# of scaffolds 417
# of scaffolds >= 2Kbp 396
Scaffold N50 53
Scaffold L50 (Mbp) 0.15
# of gaps 37
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.79, 0.57, 0.49


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 30039 27100 90.2%
Ests est.fasta 39100825 38778833 99.2%


Gene Models FilteredModels1
length (bp) of: average median
gene 1794 1547
transcript 1637 1406
exon 534 320
intron 78 59
description:
protein length (aa) 452 373
exons per gene 3.06 3
# of gene models 10253


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.