Info • Aspergillus creber IBT 32277 v1.0

Status

[November 2019] The Aspergillus creber IBT 32277 v1.0 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus creber v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 35.48
Sequencing read coverage depth 63.9x
# of contigs 440
# of scaffolds 422
# of scaffolds >= 2Kbp 307
Scaffold N50 30
Scaffold L50 (Mbp) 0.44
# of gaps 18
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.31, 0.96, 0.86


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 49546 47851 96.6%
Ests est.fasta 131341131 129032457 98.2%


Gene Models FilteredModels1
length (bp) of: average median
gene 1905 1672
transcript 1737 1523
exon 535 318
intron 77 60
description:
protein length (aa) 487 415
exons per gene 3.24 3
# of gene models 13531


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.