Status
[February 2021] The Aspergillus neocaesiellus DTO 356-D2 v1.0 genome was sequenced with Illumina, assembled with SPAdes, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.
| Genome Assembly | |
| Genome Assembly size (Mbp) | 22.52 |
| Sequencing read coverage depth | 157.3x |
| # of contigs | 462 |
| # of scaffolds | 457 |
| # of scaffolds >= 2Kbp | 435 |
| Scaffold N50 | 77 |
| Scaffold L50 (Mbp) | 0.09 |
| # of gaps | 5 |
| % of scaffold length in gaps | 0.0% |
| Three largest Scaffolds (Mbp) | 0.44, 0.39, 0.36 |
| ESTs | Data set | # sequences total | # mapped to genome | % mapped to genome |
| EstClusters | ESTclusters | 32995 | 32283 | 97.8% |
| Ests | est.fasta | 208403315 | 207178208 | 99.4% |
| Gene Models | FilteredModels1 | |
| length (bp) of: | average | median |
| gene | 2021 | 1762 |
| transcript | 1847 | 1601 |
| exon | 594 | 354 |
| intron | 84 | 66 |
| description: | ||
| protein length (aa) | 493 | 413 |
| exons per gene | 3.11 | 3 |
| # of gene models | 8563 |
Collaborators
Links
Funding
The work conducted by the U.S. Department of Energy Joint Genome
Institute, a DOE Office of Science User Facility, is supported by
the Office of Science of the U.S. Department of Energy under
Contract No. DE-AC02-05CH11231.
