Info • Aspergillus nomius IBT 12657 v1.0

Status

[October 2016] The Aspergillus nomius IBT 12657 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline.

Summary statistics for the Aspergillus nomius v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 36.71
Sequencing read coverage depth 84.6x
# of contigs 320
# of scaffolds 290
# of scaffolds >= 2Kbp 255
Scaffold N50 32
Scaffold L50 (Mbp) 0.33
# of gaps 30
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.19, 1.09, 1.08


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 23736 23291 98.1%
Ests est.fasta 30985159 30716814 99.1%


Gene Models FilteredModels1
length (bp) of: average median
gene 1829 1602
transcript 1642 1433
exon 508 304
intron 86 62
description:
protein length (aa) 469 397
exons per gene 3.23 3
# of gene models 12897


Genome Reference(s)

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.