Info • Aspergillus olivicola v1.0

Status

[March 2016] The Aspergillus olivicola CBS 597.65 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline

Summary statistics for the Aspergillus olivicola v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 33.17
Sequencing read coverage depth 37.3x
# of contigs 840
# of scaffolds 824
# of scaffolds >= 2Kbp 722
Scaffold N50 119
Scaffold L50 (Mbp) 0.09
# of gaps 16
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.49, 0.42, 0.30


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 31729 30417 95.9%
Ests est.fasta 33528337 33355288 99.5%


Gene Models FilteredModels1
length (bp) of: average median
gene 1825 1593
transcript 1654 1442
exon 528 317
intron 82 60
description:
protein length (aa) 466 390
exons per gene 3.13 3
# of gene models 12183


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.