Info • Aspergillus spiritus DTO 241-G7 v1.0

Status

[February 2021] The Aspergillus spiritus DTO 241-G7 v1.0 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Genome Assembly
Genome Assembly size (Mbp) 26.17
Sequencing read coverage depth 86.8x
# of contigs 763
# of scaffolds 744
# of scaffolds >= 2Kbp 663
Scaffold N50 105
Scaffold L50 (Mbp) 0.08
# of gaps 19
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.34, 0.28, 0.26


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 37470 35290 94.2%
Ests est.fasta 188399792 184202845 97.8%


Gene Models FilteredModels1
length (bp) of: average median
gene 1870 1619
transcript 1705 1474
exon 543 326
intron 79 59
description:
protein length (aa) 452 371
exons per gene 3.14 3
# of gene models 10176


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.