Info • Aspergillus thermomutatus v1.0

Status

[October 2016] The Aspergillus thermomutatus CBS 207.92 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline.

Summary statistics for the Aspergillus thermomutatus v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 31.40
Sequencing read coverage depth 83.6x
# of contigs 452
# of scaffolds 431
# of scaffolds >= 2Kbp 315
Scaffold N50 32
Scaffold L50 (Mbp) 0.30
# of gaps 21
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.16, 0.88, 0.86


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 31818 31074 97.7%
Ests est.fasta 70918583 53581325 75.6%


Gene Models FilteredModels1
length (bp) of: average median
gene 1852 1604
transcript 1683 1454
exon 527 320
intron 79 61
description:
protein length (aa) 463 385
exons per gene 3.19 3
# of gene models 11553


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.