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Info • Bathycoccus prasinos RCC1105

Status

The genome sequence and gene models of Bathycoccus prasinos have not been determined by the JGI, but were downloaded from NCBI, on March 27, 2018. In order to allow comparative analyses with other genomes sequenced by the Joint Genome Institute, a copy of this genome is incorporated into the JGI Genome Portal. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated.

Summary statistics for the Bathycoccus prasinos RCC1105 release are below.
Genome Assembly
Genome Assembly size (Mbp) 15.07
Sequencing read coverage depth 22x
# of contigs 39
# of scaffolds 21
# of scaffolds >= 2Kbp 21
Scaffold N50 7
Scaffold L50 (Mbp) 0.96
# of gaps 18
% of scaffold length in gaps 0.2%
Three largest Scaffolds (Mbp) 1.35, 1.12, 1.09


Gene Models ExternalModels
length (bp) of: average median
gene 1597 1272
transcript 1566 1242
exon 1316 1050
intron 165 133
description:
protein length (aa) 522 414
exons per gene 1.19 1
# of gene models 7900


Genome Reference(s)

Funding

This project was not sequenced at the JGI.