Info • Blastomyces dermatitidis SLH14081

Status

This genome was sequenced by the Broad Institute. Please check their data use policies.

Summary statistics for the Blastomyces dermatitidis SLH14081 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 75.35
Sequencing read coverage depth 8.45x
# of contigs 1791
# of scaffolds 100
# of scaffolds >= 2Kbp 100
Scaffold N50 8
Scaffold L50 (Mbp) 2.44
# of gaps 1691
% of scaffold length in gaps 1.3%
Three largest Scaffolds (Mbp) 8.17, 7.10, 6.43


Gene Models BroadModels
length (bp) of: average median
gene 2681 2382
transcript 2423 2122
exon 727 389
intron 112 85
description:
protein length (aa) 450 367
exons per gene 3.33 3
# of gene models 11343


Genome Reference(s)

Please cite the following publication(s) if you use the data from this genome in your research:

Muñoz JF, Gauthier GM, Desjardins CA, Gallo JE, Holder J, Sullivan TD, Marty AJ, Carmen JC, Chen Z, Ding L, Gujja S, Magrini V, Misas E, Mitreva M, Priest M, Saif S, Whiston EA, Young S, Zeng Q, Goldman WE, Mardis ER, Taylor JW, McEwen JG, Clay OK, Klein BS, Cuomo CA
The Dynamic Genome and Transcriptome of the Human Fungal Pathogen Blastomyces and Close Relative Emmonsia.
PLoS Genet. 2015 Oct;11(10):e1005493. doi: 10.1371/journal.pgen.1005493

Funding

This project was not sequenced at the JGI.