Info • Botrytis cinerea v1.0


The genome of Botrytis cinerea was not sequenced by the JGI, but by the BROAD Institute. A copy of the genome was downloaded from and is incorporated into MycoCosm, so it can be used in comparative studies. JGI eukaryotic tools were used to annotate the predicted genes.

Summary statistics for the Botrytis cinerea v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp} 42.66
Sequencing read coverage depth unknown
# of contigs 4534
# of scaffolds 588
# of scaffolds >= 2Kbp 318
Scaffold N50 50
Scaffold L50 (Mbp) 0.26
# of gaps 3946
% of scaffold length in gaps 9.1%
Three largest Scaffolds (Mbp) 1.31, 1.01, 0.93

Gene Models ExternalModels
length (bp) of: average median
gene 1229 968
transcript 1005 744
exon 381 190
intron 139 76
protein length (aa) 334 247
exons per gene 2.64 2
# of gene models 16447

Genome Reference(s)


This project was not sequenced at the JGI.