Info • Chaetomium sp. 1176438 v1.0

Status

[January 2021] The Chaetomium sp. 1176438 v1.0 genome was sequenced with PacBio, assembled with Falcon, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Chaetomium sp. 1176438 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 33.84
Sequencing read coverage depth 481.47x
# of contigs 28
# of scaffolds 28
# of scaffolds >= 2Kbp 28
Scaffold N50 3
Scaffold L50 (Mbp) 4.50
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 6.82, 6.59, 4.50


Gene Models FilteredModels1
length (bp) of: average median
gene 1813 1495
transcript 1601 1326
exon 527 279
intron 106 75
description:
protein length (aa) 534 442
exons per gene 3.04 3
# of gene models 9520


Collaborators

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.