Info • Chlorella sp. A99


The Chlorella sp. A99 genome assembly and gene models have not been determined by the JGI, but were downloaded from Okinawa Institute of Science and Technology on October 31, 2019.Please note that this copy of the genome is not maintained by OIST and is therefore not automatically updated. In order to allow comparative analyses with other algal genomes sequenced by the JGI, a copy of this genome is incorporated into PhycoCosm. The JGI Annotation Pipeline was used to add functional annotation to this genome.

Summary statistics for the Chlorella sp. A99 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 40.93
Sequencing read coverage depth
# of contigs 1846
# of scaffolds 82
# of scaffolds >= 2Kbp 65
Scaffold N50 9
Scaffold L50 (Mbp) 1.73
# of gaps 1764
% of scaffold length in gaps 3.3%
Three largest Scaffolds (Mbp) 4.00, 3.45, 2.55

Gene Models ExternalModels
length (bp) of: average median
gene 4156 3225
transcript 1842 1389
exon 184 116
intron 211 174
protein length (aa) 614 463
exons per gene 9.99 8
# of gene models 8298

Genome Reference(s)


This project was not sequenced at the JGI.