Info • Chlorella sorokiniana DOE1412
Please note that this organism is for archival use only. Please see the current Chlorella sorokiniana DOE1412 site for the latest data and information.


The Chlorella sorokiniana DOE1412 genome sequence and gene models have not been determined by the JGI, but were downloaded from the Los Alamos National Laboratory (LANL) Greenhouse portal on October 31, 2019. Please note that this copy of the genome is not maintained by LANL and is therefore not automatically updated. In order to allow comparative analyses with other algal genomes sequenced by the JGI, a copy of this genome is incorporated into PhycoCosm. The JGI Annotation Pipeline was used to add functional annotation to this genome.

Summary statistics for the Chlorella sorokiniana DOE1412 release are below.
Genome Assembly
Genome Assembly size (Mbp) 57.88
Sequencing read coverage depth 92x
# of contigs 65
# of scaffolds 65
# of scaffolds >= 2Kbp 65
Scaffold N50 10
Scaffold L50 (Mbp) 2.03
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 5.45, 4.05, 3.07

Gene Models ExternalModels
length (bp) of: average median
gene 4791 3271
transcript 2036 1488
exon 156 101
intron 231 181
protein length (aa) 644 461
exons per gene 13.04 9
# of gene models 12611

Genome Reference(s)


This project was not sequenced at the JGI.