Info • Chrysochromulina tobin CCMP291


The genome sequence and gene models of Chrysochromulina tobin have not been determined by the JGI, but were downloaded from LANL Greenhouse, on June 20, 2017. In order to allow comparative analyses with other genomes sequenced by the Joint Genome Institute, a copy of this genome is incorporated into the JGI Genome Portal. Please note that this copy of the genome is not maintained by LANL and is therefore not automatically updated.

Summary statistics for the Chrysochromulina tobin CCMP291 release are below.
Genome Assembly
Genome Assembly size (Mbp) 59.07
Sequencing read coverage depth 111x
# of contigs 3412
# of scaffolds 3412
# of scaffolds >= 2Kbp 3294
Scaffold N50 798
Scaffold L50 (Mbp) 0.02
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.12, 0.11, 0.10

Gene Models ExternalModels
length (bp) of: average median
gene 1899 1407
transcript 1492 1137
exon 661 447
intron 318 185
protein length (aa) 466 356
exons per gene 2.26 2
# of gene models 16770

Genome Reference(s)


This project was not sequenced at the JGI.