Info • Cladophialophora immunda CBS83496

Status

Cladophialophora immunda was sequenced by the Broad Institute as part of the black yeast comparative genomics project. The genome and gene models of Cladophialophora immunda were downloaded from NCBI on June 1, 2016. JGI tools were used to add functional annotations to the gene models. Please note that this copy of the genome is not maintained by NCBI or the Broad Institute and is therefore not automatically updated. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm.

 

Summary statistics for the Cladophialophora immunda release are below.
Genome Assembly
Genome Assembly size (Mbp) 43.03
Sequencing read coverage depth
# of contigs 363
# of scaffolds 277
# of scaffolds >= 2Kbp 207
Scaffold N50 4
Scaffold L50 (Mbp) 6.03
# of gaps 86
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 8.23, 7.07, 6.05


Gene Models ExternalModels
length (bp) of: average median
gene 2135 1938
transcript 1996 1792
exon 759 446
intron 85 61
description:
protein length (aa) 494 429
exons per gene 2.63 2
# of gene models 14033


Genome Reference(s)

Funding

This project was not sequenced at the JGI.