from Damm U, Cannon PF, Woudenberg JH, Crous PW. The Colletotrichum acutatum species complex. Stud Mycol. 2012 Sep 15;73(1):37-113. used under a Creative Commons Licence BY-NC-ND 3.0.
The genome sequence and gene prediction of Colletotrichum limetticola KLA-Anderson have not been determined by the Joint Genome Institute (JGI), but were downloaded from NCBI on Oct 20, 2024. All published models are available as ExternalModels. In order to ensure this genome is comparable to those sequenced and annotated by the JGI, we applied standard filters to ExternalModels to produce the initial GeneCatalog. A total of 955 ExternalModels were excluded based on one of the following classifications: 1) association with repetitive elements, 2) pseudogenes with internal stop codons, 3) alternative isoforms or overlapping transcript models, 4) alleles on secondary scaffolds, and 5) short models lacking functional annotation. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm. The JGI Annotation Pipeline was used to add functional annotation to the genes.
The following text has been adapted from Menicucci et. al.
2023.
Colletotrichum limetticola (formerly known as
Gloeosporium limetticola) was initially described as a
species predominantly associated with wither tip symptoms on sour
lime (Citrus aurantiifolia) in Cuba and the USA during the
1910s. Later descriptions associated the disease with strains of
C. gloeosporioides or C. acutatum. Recent
findings in Brazil have revealed the presence of C.
limetticola causing Glomerella leaf spot on apples,
although its prevalence remains low while displaying high
virulence.
Genome Reference(s)
Menicucci Andrea, Tikami Isis, Benocci Tiziano, Zapparata Antonio, Massola Júnior Nelson Sidnei, Peres Natalia Aparecida, Timmer Lavern Wayne, Prodi Antonio, Baroncelli Riccardo
Draft genome sequence of the keylime (Citrus × aurantiifolia) pathogen Colletotrichum limetticola
J Plant Pathol. 2023;105(3):1145-1148. doi: 10.1007/s42161-023-01439-5