Info • Colletotrichum simmondsii CBS122122


The genome sequence and gene prediction of Colletotrichum simmondsii CBS122122 have not been determined by the JGI, but were provided by Michael Thon at the University of Salamanca, Spain. Please note that this copy of the genome is not maintained by the author and is therefore not automatically updated. JGI tools were used to automatically annotate predicted proteins.


Summary statistics for the Colletotrichum simmondsii CBS122122 release are below.
Genome Assembly
Genome Assembly size (Mbp) 50.47
Sequencing read coverage depth 39.38x
# of contigs 1451
# of scaffolds 929
# of scaffolds >= 2Kbp 480
Scaffold N50 55
Scaffold L50 (Mbp) 0.29
# of gaps 522
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.80, 0.79, 0.79

Gene Models ExternalModels
length (bp) of: average median
gene 1683 1438
transcript 1499 1263
exon 511 285
intron 98 64
protein length (aa) 500 421
exons per gene 2.93 2
# of gene models 13884

Genome Reference(s)


This project was not sequenced at the JGI.