Info • Cyanidioschyzon merolae strain 10D


The genome sequence and gene models of Cyanidioschyzon merolae were not determined by the Joint Genome Institute (JGI), but were downloaded from NCBI on June 11, 2018. In order to allow comparative analyses with other genomes sequenced by the JGI, a copy of this genome is incorporated into the JGI Genome Portal. JGI tools were used to automatically annotate predicted proteins. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated.

Summary statistics for the Cyanidioschyzon merolae strain 10D release are below.
Genome Assembly
Genome Assembly size (Mbp) 16.55
Sequencing read coverage depth
# of contigs 20
# of scaffolds 20
# of scaffolds >= 2Kbp 20
Scaffold N50 8
Scaffold L50 (Mbp) 0.86
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.62, 1.28, 1.25

Gene Models ExternalModels
length (bp) of: average median
gene 1551 1275
transcript 1549 1275
exon 1541 1260
intron 250 236
protein length (aa) 516 425
exons per gene 1.01 1
# of gene models 4803

Genome Reference(s)


This project was not sequenced at the JGI.