Info • Debaryomyces fabryi NRRL Y-17914

Status

The Debaryomyces fabryi NRRL Y-17914 genome sequence and gene models were not determined by the Joint Genome Institute (JGI) but were provided by John Wolters on Nov 24, 2021. Please note that this copy of the genome is not maintained by John and is therefore not automatically updated. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into MycoCosm. The JGI Annotation Pipeline was used to add the functional annotation to this genome.

Genome Assembly
Genome Assembly size (Mbp) 11.91
Sequencing read coverage depth Unknown
# of contigs 258
# of scaffolds 257
# of scaffolds >= 2Kbp 53
Scaffold N50 6
Scaffold L50 (Mbp) 0.87
# of gaps 1
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.43, 1.08, 1.06


Gene Models ExternalModels
length (bp) of: average median
gene 1486 1248
transcript 1474 1242
exon 1341 1119
intron 123 69
description:
protein length (aa) 491 414
exons per gene 1.10 1
# of gene models 6116


Collaborators

Genome Reference(s)

Please cite the following publication(s) if you use the data from this genome in your research:

Shen XX, Opulente DA, Kominek J, Zhou X, Steenwyk JL, Buh KV, Haase MAB, Wisecaver JH, Wang M, Doering DT, Boudouris JT, Schneider RM, Langdon QK, Ohkuma M, Endoh R, Takashima M, Manabe RI, Čadež N, Libkind D, Rosa CA, DeVirgilio J, Hulfachor AB, Groenewald M, Kurtzman CP, Hittinger CT, Rokas A
Tempo and Mode of Genome Evolution in the Budding Yeast Subphylum.
Cell. 2018 Nov 29;175(6):1533-1545.e20. doi: 10.1016/j.cell.2018.10.023

Funding

This project was not sequenced at the JGI.