Info • Emergomyces pasteurianus UAMH 9510

Status

The genome sequence and gene models of Emergomyces pasteurianus UAMH 9510 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.


Genome Assembly
Genome Assembly size (Mbp) 32.41
Sequencing read coverage depth
# of contigs 1738
# of scaffolds 1643
# of scaffolds >= 2Kbp 1448
Scaffold N50 200
Scaffold L50 (Mbp) 0.05
# of gaps 95
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.27, 0.25, 0.24


Gene Models ExternalModels
length (bp) of: average median
gene 1640 1387
transcript 1435 1185
exon 478 252
intron 104 82
description:
protein length (aa) 478 395
exons per gene 3.00 3
# of gene models 8950


Genome Reference(s)

Please cite the following publication(s) if you use the data from this genome in your research:

Dukik K, Muñoz JF, Jiang Y, Feng P, Sigler L, Stielow JB, Freeke J, Jamalian A, Gerrits van den Ende B, McEwen JG, Clay OK, Schwartz IS, Govender NP, Maphanga TG, Cuomo CA, Moreno LF, Kenyon C, Borman AM, de Hoog S
Novel taxa of thermally dimorphic systemic pathogens in the Ajellomycetaceae (Onygenales).
Mycoses. 2017 May;60(5):296-309. doi: 10.1111/myc.12601

Funding

This project was not sequenced at the JGI.