Info • Fusarium graminearum v1.0

Status

The genome of Fusarium graminearum strain PH-1 was sequenced by the BROAD Institute. In order to allow comparative analyses with other fungi, a copy of the genome of F. graminearum is incorporated into MycoCosm. It was downloaded from the website of the BROAD Institute on May 20th, 2011.

Summary statistics for the Fusarium graminearum v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp} 36.45
Sequencing read coverage depth unknown
# of contigs 433
# of scaffolds 31
# of scaffolds >= 2Kbp 31
Scaffold N50 3
Scaffold L50 (Mbp) 5.35
# of gaps 402
% of scaffold length in gaps 0.6%
Three largest Scaffolds (Mbp) 8.93, 5.45, 5.35


Gene Models ExternalModels
length (bp) of: average median
gene 1582 1355
transcript 1430 1206
exon 508 284
intron 86 58
description:
protein length (aa) 445 366
exons per gene 2.82 2
# of gene models 13322


Genome Reference(s)

Funding

This project was not sequenced at the JGI.