Info • Fusarium oxysporum f. sp. lycopersici 4287 v2


The genome sequence and gene prediction of Fusarium oxysporum f. sp. lycopersici have not been determined by the JGI, but were downloaded from the Broad Institute on November 14th 2015. Please note that this copy of the genome is not maintained by Broad and is therefore not automatically updated. JGI tools were used to automatically annotate predicted proteins.

Summary statistics for the Fusarium oxysporum f. sp. lycopersici release are below.
Genome Assembly
Genome Assembly size (Mbp) 61.36
Sequencing read coverage depth unknown
# of contigs 1362
# of scaffolds 114
# of scaffolds >= 2Kbp 112
Scaffold N50 11
Scaffold L50 (Mbp) 1.98
# of gaps 1248
% of scaffold length in gaps 2.3%
Three largest Scaffolds (Mbp) 4.36, 4.03, 3.31

Gene Models ExternalModels
length (bp) of: average median
gene 2185 1850
transcript 2027 1706
exon 683 407
intron 83 57
protein length (aa) 435 366
exons per gene 2.97 3
# of gene models 27347

Genome Reference(s)


This project was not sequenced at the JGI.