Info • Galdieria phlegrea Soos

Status

The Galdieria phlegrea Soos genome sequence and gene models have not been determined by the JGI, but were downloaded from the Red Algal Resources to Promote Integrative Research in Algal Genomics webpage on October 31, 2019. Please note that this copy of the genome is not maintained by Red Algal Resources and is therefore not automatically updated. In order to allow comparative analyses with other algal genomes sequenced by the JGI, a copy of this genome is incorporated into PhycoCosm. The JGI Annotation Pipeline was used to add functional annotation to this genome.

Summary statistics for the Galdieria phlegrea Soos release are below.
Genome Assembly
Genome Assembly size (Mbp) 14.87
Sequencing read coverage depth
# of contigs 108
# of scaffolds 108
# of scaffolds >= 2Kbp 108
Scaffold N50 28
Scaffold L50 (Mbp) 0.20
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.45, 0.40, 0.36


Gene Models ExternalModels
length (bp) of: average median
gene 1459 1200
transcript 1307 1086
exon 396 212
intron 63 54
description:
protein length (aa) 436 362
exons per gene 3.30 3
# of gene models 6125


Genome Reference(s)

Funding

This project was not sequenced at the JGI.