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Info • Galdieria sulphuraria 074W

Status

The genome sequence and gene models of Galdieria sulphuraria have not been determined by the JGI, but were downloaded from NCBI, on March 27, 2018. In order to allow comparative analyses with other genomes sequenced by the Joint Genome Institute, a copy of this genome is incorporated into the JGI Genome Portal. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated.

Summary statistics for the Galdieria sulphuraria release are below.
Genome Assembly
Genome Assembly size (Mbp) 13.71
Sequencing read coverage depth 8.55x
# of contigs 483
# of scaffolds 433
# of scaffolds >= 2Kbp 426
Scaffold N50 30
Scaffold L50 (Mbp) 0.17
# of gaps 50
% of scaffold length in gaps 2.1%
Three largest Scaffolds (Mbp) 0.47, 0.31, 0.30


Gene Models ExternalModels
length (bp) of: average median
gene 1605 1375
transcript 1484 1275
exon 467 247
intron 57 53
description:
protein length (aa) 420 351
exons per gene 3.18 2
# of gene models 7174


Genome Reference(s)

Funding

This project was not sequenced at the JGI.