Info • Galdieria sulphuraria 002

Status

The Galdieria sulphuraria 002 genome sequence and gene models have not been determined by the JGI, but were downloaded from the Red Algal Resources to Promote Integrative Research in Algal Genomics webpage on October 31, 2019. Please note that this copy of the genome is not maintained by Red Algal Resources and is therefore not automatically updated. In order to allow comparative analyses with other algal genomes sequenced by the JGI, a copy of this genome is incorporated into PhycoCosm. The JGI Annotation Pipeline was used to add functional annotation to this genome.

Summary statistics for the Galdieria sulphuraria 002 release are below.
Genome Assembly
Genome Assembly size (Mbp) 14.11
Sequencing read coverage depth
# of contigs 107
# of scaffolds 107
# of scaffolds >= 2Kbp 107
Scaffold N50 30
Scaffold L50 (Mbp) 0.19
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.35, 0.34, 0.30


Gene Models ExternalModels
length (bp) of: average median
gene 1544 1257
transcript 1366 1128
exon 368 212
intron 66 52
description:
protein length (aa) 455 376
exons per gene 3.71 3
# of gene models 5912


Genome Reference(s)

Funding

This project was not sequenced at the JGI.