Info • Galdieria sulphuraria MtSh

Status

The Galdieria sulphuraria MtSh genome sequence and gene models have not been determined by the JGI, but were downloaded from the Red Algal Resources to Promote Integrative Research in Algal Genomics webpage on October 31, 2019. Please note that this copy of the genome is not maintained by Red Algal Resources and is therefore not automatically updated. In order to allow comparative analyses with other algal genomes sequenced by the JGI, a copy of this genome is incorporated into PhycoCosm. The JGI Annotation Pipeline was used to add functional annotation to this genome.

Summary statistics for the Galdieria sulphuraria MtSh release are below.
Genome Assembly
Genome Assembly size (Mbp) 15.00
Sequencing read coverage depth
# of contigs 101
# of scaffolds 101
# of scaffolds >= 2Kbp 101
Scaffold N50 29
Scaffold L50 (Mbp) 0.19
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.50, 0.43, 0.39


Gene Models ExternalModels
length (bp) of: average median
gene 1632 1283
transcript 1424 1125
exon 331 198
intron 61 53
description:
protein length (aa) 475 375
exons per gene 4.30 3
# of gene models 6160


Genome Reference(s)

Funding

This project was not sequenced at the JGI.