Info • Kuraishia capsulata CBS 1993

Status

The genome sequence and gene prediction of Kuraishia capsulata CBS 1993 have not been determined by the JGI, but were downloaded from NCBI on May 31, 2016. In order to allow comparative analyses with other fungal genomes sequenced by the Joint Genome Institute, a copy of this genome is incorporated into Mycocosm. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated.

 

Summary statistics for the Kuraishia capsulata CBS 1993 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 11.37
Sequencing read coverage depth
# of contigs 57
# of scaffolds 7
# of scaffolds >= 2Kbp 7
Scaffold N50 3
Scaffold L50 (Mbp) 1.68
# of gaps 50
% of scaffold length in gaps 0.3%
Three largest Scaffolds (Mbp) 2.37, 1.75, 1.68


Gene Models ExternalModels
length (bp) of: average median
gene 1400 1185
transcript 1386 1176
exon 1178 1002
intron 86 65
description:
protein length (aa) 462 392
exons per gene 1.18 1
# of gene models 6029


Genome Reference(s)

Please cite the following publication(s) if you use the data from this genome in your research:

Morales L, Noel B, Porcel B, Marcet-Houben M, Hullo MF, Sacerdot C, Tekaia F, Leh-Louis V, Despons L, Khanna V, Aury JM, Barbe V, Couloux A, Labadie K, Pelletier E, Souciet JL, Boekhout T, Gabaldon T, Wincker P, Dujon B
Complete DNA sequence of Kuraishia capsulata illustrates novel genomic features among budding yeasts (Saccharomycotina).
Genome Biol Evol. 2013;5(12):2524-39. doi: 10.1093/gbe/evt201

Funding

This project was not sequenced at the JGI.