Info • Labyrinthula sp. SR_Ha_C


The Labyrinthula sp. SR_Ha_C genome sequence and gene models have not been determined by the JGI, but were provided by Stacey Trevathan-Tackett at Deakin University. Please note that this copy of the genome is not maintained by Trevathan-Tackett and Tan and is therefore not automatically updated. In order to allow comparative analyses with other algal genomes sequenced by the JGI, a copy of this genome is incorporated into PhycoCosm. The JGI Annotation Pipeline was used to add functional annotation to this genome.

Genome Assembly
Genome Assembly size (Mbp) 50.95
Sequencing read coverage depth
# of contigs 159
# of scaffolds 159
# of scaffolds >= 2Kbp 159
Scaffold N50 14
Scaffold L50 (Mbp) 1.27
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 3.30, 2.82, 2.26

Gene Models DU_gene_models
length (bp) of: average median
gene 1603 1301
transcript 1512 1245
exon 745 458
intron 90 32
protein length (aa) 471 371
exons per gene 2.03 2
# of gene models 8488

Genome Reference(s)



This project was not sequenced at the JGI.