Info • Lachancea meyersii CBS 8951

Status

The genome sequence and gene models of Lachancea meyersii CBS 8951 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.

Summary statistics for the Lachancea meyersii CBS 8951 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 11.26
Sequencing read coverage depth
# of contigs 17
# of scaffolds 8
# of scaffolds >= 2Kbp 8
Scaffold N50 3
Scaffold L50 (Mbp) 2.01
# of gaps 9
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 2.05, 2.05, 2.01


Gene Models ExternalModels
length (bp) of: average median
gene 1481 1230
transcript 1471 1224
exon 1378 1152
intron 155 91
description:
protein length (aa) 490 407
exons per gene 1.07 1
# of gene models 4998


Genome Reference(s)

Please cite the following publication(s) if you use the data from this genome in your research:

Vakirlis N, Sarilar V, Drillon G, Fleiss A, Agier N, Meyniel JP, Blanpain L, Carbone A, Devillers H, Dubois K, Gillet-Markowska A, Graziani S, Huu-Vang N, Poirel M, Reisser C, Schott J, Schacherer J, Lafontaine I, Llorente B, Neuvéglise C, Fischer G
Reconstruction of ancestral chromosome architecture and gene repertoire reveals principles of genome evolution in a model yeast genus.
Genome Res. 2016 Jul;26(7):918-32. doi: 10.1101/gr.204420.116

Funding

This project was not sequenced at the JGI.