Info • Lachancea quebecensis INRA UMR 1319

Status

The genome sequence and gene models of Lachancea quebecensis INRA UMR 1319 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.

Summary statistics for the Lachancea quebecensis INRA UMR 1319 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 10.23
Sequencing read coverage depth
# of contigs 92
# of scaffolds 51
# of scaffolds >= 2Kbp 51
Scaffold N50 6
Scaffold L50 (Mbp) 0.53
# of gaps 41
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.37, 0.93, 0.84


Gene Models ExternalModels
length (bp) of: average median
gene 1470 1224
transcript 1461 1218
exon 1370 1146
intron 136 82
description:
protein length (aa) 487 406
exons per gene 1.07 1
# of gene models 5074


Genome Reference(s)

Please cite the following publication(s) if you use the data from this genome in your research:

Freel KC, Friedrich A, Sarilar V, Devillers H, Neuvéglise C, Schacherer J
Whole-Genome Sequencing and Intraspecific Analysis of the Yeast Species Lachancea quebecensis.
Genome Biol Evol. 2016 Jan 5;8(3):733-41. doi: 10.1093/gbe/evv262

Funding

This project was not sequenced at the JGI.