Status
The genome and gene models of Mortierella verticillata NRRL 6337 were downloaded from NCBI on Oct 21, 2016. JGI tools were used to add functional annotations to the gene models. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm.
Assembly Method :: Arachne Hybrid Assembler v. Nov. 2010
Sequencing Technology :: Illumina; ABI Sanger
Summary statistics for the Mortierella verticillata NRRL
6337 release are below.
| Genome Assembly | |
| Genome Assembly size (Mbp) | 41.85 |
| Sequencing read coverage depth | 225.0x |
| # of contigs | 700 |
| # of scaffolds | 55 |
| # of scaffolds >= 2Kbp | 55 |
| Scaffold N50 | 6 |
| Scaffold L50 (Mbp) | 2.91 |
| # of gaps | 645 |
| % of scaffold length in gaps | 2.5% |
| Three largest Scaffolds (Mbp) | 5.07, 4.98, 3.36 |
| Gene Models | ExternalModels | |
| length (bp) of: | average | median |
| gene | 2109 | 1809 |
| transcript | 1696 | 1433 |
| exon | 447 | 244 |
| intron | 148 | 102 |
| description: | ||
| protein length (aa) | 519 | 428 |
| exons per gene | 3.80 | 3 |
| # of gene models | 12569 |
Funding
This project was not sequenced at the JGI.
