Info • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

## Name Assembly Length # Genes Published
1 Acephala macrosclerotiorum EW76-UTF0540 v1.0 73,683,338 21,024 Miyauchi S et al., 2020
2 Amanita aff. conicoverrucosa KIS12 v1.0 73,090,178 10,566
3 Amanita muscaria Koide v1.0 40,699,759 18,153 Kohler A et al., 2015
4 Amanita muscaria var. formosa 2016PMI152 v1.0 110,261,529 15,793
5 Amanita rubescens Přilba v1.0 76,593,165 16,076 Miyauchi S et al., 2020
6 Boletus coccyginus 2016PMI039 v1.0 54,939,811 12,353
7 Boletus edulis BED1 v4.0 66,525,535 18,722 Miyauchi S et al., 2020
8 Boletus edulis Přilba v1.0 69,185,680 18,123 Miyauchi S et al., 2020
9 Boletus reticuloceps BR01 55,835,099 13,195 Wu G et al., 2022
10 Butyriboletus roseoflavus v1.0 33,976,981 12,051 Wu G et al., 2022
11 Cantharellus anzutake C23 v1.0 120,173,979 16,968 Miyauchi S et al., 2020
12 Cenococcum geophilum 1.58 v2.0 177,557,160 14,748 Peter M et al., 2016
13 Ceratobasidium sp. 379 v1.0 83,869,204 17,852
14 Ceratobasidium sp. 394 v1.0 84,469,429 17,873
15 Ceratobasidium sp. 395 v1.0 85,352,376 18,780
16 Ceratobasidium sp. 423 v1.0 131,591,190 25,503
17 Ceratobasidium sp. anastomosis group I; DN8442 v1.0 58,444,101 18,060 Miyauchi S et al., 2020
18 Chalciporus piperatus 201810 CP v1.0 46,257,842 13,336
19 Chiua virens LA06 48,496,802 13,144 Wu G et al., 2022
20 Choiromyces venosus 120613-1 v1.0 126,035,033 17,986 Murat C et al., 2018
21 Cortinarius abnormis TAS10R v1.0 190,430,036 17,498
22 Cortinarius aff. campbellae TAS5-PSC4363 v1.0 76,968,950 17,407
23 Cortinarius archeri SA1 v1.0 87,732,974 15,180
24 Cortinarius austrovenetus TL2843-KIS7R v1.0 62,325,647 14,941
25 Cortinarius saniosus 2018PMI107 v2.0 210,564,141 26,370
26 Cortinarius sp. KIS3-TL2766 v1.0 50,107,275 11,569
27 Cortinarius sp. TAS3 v1.0 141,787,444 20,244
28 Darksidea alpha DSE7016 v1.0 71,864,992 16,839
29 Elaphomyces granulatus OSC145934 54,153,615 7,178 Quandt CA et al., 2015
30 Elaphomyces muricatus BavarianF46 v1.0 80,636,695 15,417
31 Gautieria morchelliformis GMNE.BST v1.0 122,807,766 20,331 Miyauchi S et al., 2020
32 Geopyxis carbonaria CBS 144460 v1.0 49,454,325 11,663 Steindorff AS et al., 2022
33 Gigaspora margarita BEG34 773,098,546 29,544 Venice F et al., 2020
34 Gigaspora rosea v1.0 567,950,182 31,291 Morin E et al., 2019
35 Gyrodon lividus BX v1.0 43,048,674 11,779 Miyauchi S et al., 2020
36 Hebeloma brunneifolium PMI1Jessy v2.0 65,279,695 20,438
37 Hebeloma cylindrosporum h7 v2.0 38,226,047 15,382 Kohler A et al., 2015
38 Hyaloscypha finlandica PMI_746 v1.0 64,032,857 17,321
39 Hyaloscypha variabilis MD1 v1.0 59,426,677 20,037
40 Hydnum rufescens UP504 v2.0 67,135,451 18,665 Miyauchi S et al., 2020
41 Hysterangium stoloniferum HS.BST v1.0 111,842,964 15,017 Miyauchi S et al., 2020
42 Inosperma lanatodiscum 2018PMI007 v1.0 123,813,904 23,215
43 Kalaharituber pfeilii F3 v1.0 78,991,937 15,190 Miyauchi S et al., 2020
44 Kalapuya brunnea GMNB372 v1.0 189,316,756 11,095
45 Kurtia argillacea OMC1749 v1.0 37,148,487 13,652
46 Laccaria amethystina LaAM-08-1 v2.0 52,581,404 17,553 Kohler A et al., 2015
47 Laccaria bicolor 81306 v1.0 50,950,722 17,791
48 Laccaria bicolor CBS 559.96 v1.0 43,460,209 16,977
49 Laccaria bicolor CBS 594.89 v1.0 69,983,628 26,800
50 Laccaria bicolor Cham3 v1.0 44,650,607 16,084
51 Laccaria bicolor D101 v1.0 70,029,479 22,538
52 Laccaria bicolor DR170 v1.0 79,066,865 24,004
53 Laccaria bicolor N203 v1.0 69,628,581 21,909
54 Laccaria bicolor S238N 93.12 v1.1 96,432,810 25,412
55 Laccaria bicolor S238N v1.0 67,655,267 21,724
56 Laccaria bicolor S238N-H53 v1.0 51,780,559 18,468
57 Laccaria bicolor S238N-H70 v1.0 57,049,857 19,903
58 Laccaria bicolor S238N-H82 v1.0 52,023,709 18,706
59 Laccaria bicolor S238N-H82xH70 v1.0 42,115,601 17,045
60 Laccaria bicolor S238O v1.0 57,057,526 17,767
61 Laccaria bicolor v2.0 60,707,050 23,130 Martin F et al., 2008
62 Laccaria sp. KIS1 v1.0 231,429,644 40,277
63 Laccaria sp. KIS6 v1.0 165,357,910 38,625
64 Lactarius akahatsu QP v1.0 80,299,772 12,853 Lebreton A et al., 2022
65 Lactarius controversus PMI44 v1.0 90,370,914 13,305
66 Lactarius deliciosus 48 v1.0 96,043,985 18,193 Lebreton A et al., 2022
67 Lactarius hatsudake 109 v1.0 95,486,030 16,831 Lebreton A et al., 2022
68 Lactarius hengduanensis 84 v1.0 61,963,203 15,957 Lebreton A et al., 2022
69 Lactarius indigo 2018DUKE089 v1.0 90,316,074 16,554 Looney B et al., 2022
70 Lactarius psammicola BPL869 v1.0 69,824,043 13,442 Looney B et al., 2022
71 Lactarius pseudohatsudake 88 v1.0 99,708,583 20,824 Lebreton A et al., 2022
72 Lactarius quietus S23C v1.0 115,901,997 18,943 Miyauchi S et al., 2020
73 Lactarius sanguifluus B21 v1.0 86,240,450 17,481 Lebreton A et al., 2022
74 Lactarius subdulcis FM v1.0 110,449,813 14,533
75 Lactarius tabidus Fr. 1825 v1.0 99,988,625 15,926
76 Lactarius vividus 141 v1.0 69,041,955 11,612 Lebreton A et al., 2022
77 Lactifluus cf. subvellereus BPL653 v1.0 44,824,221 12,802 Looney B et al., 2022
78 Lactifluus cf. volemus BPL652 v1.0 62,975,844 14,970 Looney B et al., 2022
79 Lanmaoa asiatica v1.0 46,638,294 14,118 Wu G et al., 2022
80 Leucangium carthusianum GMNB180 v1.0 114,191,169 12,369
81 Mattirolomyces terfezioides MAT_tt4AIII v1.0 50,061,460 10,894
82 Melanogaster broomeianus MBLB.BST v1.0 49,614,189 14,167 Miyauchi S et al., 2020
83 Meliniomyces bicolor E v2.0 82,384,847 18,619 Martino E et al., 2018
84 Meliniomyces sp. PMI_1271 v1.0 62,840,624 17,286
85 Meliniomyces variabilis F v1.0 55,857,776 20,389 Martino E et al., 2018
86 Morchella importuna CCBAS932 v1.0 48,213,273 11,600 Murat C et al., 2018
87 Multifurca ochricompacta BPL690 v1.0 54,697,930 10,514 Looney B et al., 2022
88 Oidiodendron maius Zn v1.0 46,426,256 16,703 Kohler A et al., 2015
89 Paraglomus occultum DAOM 240472 44,932,488 9,286 Malar C M et al., 2022
90 Paragyrodon sphaerosporus FC442 v2.0 41,914,842 11,162
91 Paxillus adelphus Ve08.2h10 v2.0 64,458,135 18,999 Kohler A et al., 2015
92 Paxillus ammoniavirescens Pou09.2 v1.0 35,762,581 13,473 Miyauchi S et al., 2020
93 Paxillus involutus ATCC 200175 v1.0 58,301,126 17,968 Kohler A et al., 2015
94 Phlebopus sp. FC_14 v2.0 36,096,188 9,409 Wu G et al., 2022
95 Phlegmacium glaucopus AT 2004 276 v2.0 63,450,306 20,377 Miyauchi S et al., 2020
96 Picoa lefebvrei Pl1701 v1.0 166,305,171 16,310
97 Piloderma byssinum 4S31 v1.0 94,846,070 22,629
98 Piloderma olivaceum F 1598 v1.0 59,326,866 21,583 Kohler A et al., 2015
99 Piloderma sphaerosporum 354 v1.0 71,854,530 20,118
100 Pisolithus albus SI12 v1.0 87,748,750 17,029 Plett JM et al., 2023
101 Pisolithus capsulifer 3163 v1.0 49,780,365 12,849
102 Pisolithus croceorrhizus ssp. 2 72 v1.0 76,507,182 15,058 Plett JM et al., 2023
103 Pisolithus croceorrhizus subspA 74A v1.0 80,714,400 15,799 Plett JM et al., 2023
104 Pisolithus marmoratus 721 v1.0 77,720,273 17,850
105 Pisolithus marmoratus ssp. 2 16A v1.0 122,384,764 21,754 Plett JM et al., 2023
106 Pisolithus microcarpus 441 v2.0 77,250,852 16,766 Kohler A et al., 2015
107 Pisolithus orientalis OTSU v2.0 57,997,239 12,203 Plett JM et al., 2023
108 Pisolithus sp. B1 v1.0 64,705,422 12,451 Plett JM et al., 2023
109 Pisolithus thermaeus 11 v1.0 81,921,463 15,712 Plett JM et al., 2023
110 Pisolithus tinctorius Marx 270 v2.0 92,528,219 16,924 Kohler A et al., 2015
111 Pisolithus tympanobaculus R1 v1.0 98,413,041 17,658
112 Rhizophagus cerebriforme DAOM 227022 v1.0 136,890,557 21,549 Morin E et al., 2019
113 Rhizophagus clarus HR1 116,418,735 27,761 Kobayashi Y et al., 2018
114 Rhizophagus diaphanus v1.0 125,876,003 23,252 Morin E et al., 2019
115 Rhizophagus irregularis 4401 146,854,905 20,178 Yildirir G et al., 2022
116 Rhizophagus irregularis A1 v2.0 147,088,061 20,492 Yildirir G et al., 2022
117 Rhizophagus irregularis A4 v1.0 138,301,208 25,760 Chen ECH et al., 2018
118 Rhizophagus irregularis A5 v1.0 131,461,109 26,585 Chen ECH et al., 2018
119 Rhizophagus irregularis B3 v2.0 146,830,121 20,098 Yildirir G et al., 2022
120 Rhizophagus irregularis C2 161,924,360 20,735 Yildirir G et al., 2022
121 Rhizophagus irregularis DAOM 181602 v1.0 91,083,792 30,282 Tisserant E et al., 2013
122 Rhizophagus irregularis DAOM197198 v2.0 147,209,168 21,599 Yildirir G et al., 2022
123 Rhizopogon salebrosus TDB-379 v1.0 82,288,552 18,900
124 Rhizopogon truncatus FC74 v1.0 38,907,862 11,852
125 Rhizopogon vesiculosus Smith 43,809,644 14,218 Mujic AB et al., 2017
126 Rhizopogon vinicolor AM-OR11-026 v1.0 36,102,320 14,469 Mujic AB et al., 2017
127 Rhizopogon vulgaris FC72 v1.0 39,902,050 11,905
128 Rhizoscyphus ericae UAMH 7357 v1.0 57,408,471 16,784 Martino E et al., 2018
129 Russula brevipes BPL707 v1.0 48,529,157 14,000 Looney B et al., 2022
130 Russula compacta BPL669 v1.0 45,678,814 10,834 Looney B et al., 2022
131 Russula decolorans Maridalen v1.0 57,038,028 12,065
132 Russula dissimulans BPL704 v1.0 44,689,478 11,865 Looney B et al., 2022
133 Russula earlei BPL698 v1.0 70,012,961 12,153 Looney B et al., 2022
134 Russula emetica 2018DUKE113 v1.0 73,758,419 13,473
135 Russula emetica Přilba v1.0 55,121,418 13,215 Miyauchi S et al., 2020
136 Russula ochroleuca Přilba v1.0 44,738,512 12,048 Miyauchi S et al., 2020
137 Russula rugulosa BPL654 v1.0 43,452,339 13,281 Looney B et al., 2022
138 Russula seminuda PSC4341-TAS1 v1.0 42,095,537 10,669
139 Russula sp. KIS4 v1.1 77,376,323 12,813
140 Russula sp. KIS8 TL3126 v1.0 72,416,190 13,876
141 Russula sp. SA2 v1.0 72,281,534 11,878
142 Russula sp. TAS8 v1.0 71,058,637 13,017
143 Russula vinacea BPL710 v1.0 43,280,073 12,673 Looney B et al., 2022
144 Scleroderma citrinum Foug A v1.0 56,144,862 21,012 Kohler A et al., 2015
145 Scleroderma citrinum hr. v1.0 77,472,219 10,323 Zhang H et al., 2025
146 Scleroderma yunnanense jo. v1.0 45,547,305 10,194 Zhang H et al., 2025
147 Sebacina vermifera MAFF 305830 v1.0 38,094,242 15,312 Kohler A et al., 2015
148 Serendipita sp. 400 v1.0 38,899,175 10,802
149 Serendipita sp. 405 v1.0 35,358,857 10,849
150 Serendipita sp. 407 v1.0 40,693,196 10,738
151 Serendipita sp. 411 v1.0 38,487,819 10,821
152 Serendipita vermifera ssp. bescii NFPB0129 v1.0 36,850,610 14,208
153 Sistotrema muscicola OMC 1658 v1.0 43,671,079 10,463
154 Sphaerosporella brunnea Sb_GMNB300 v2.0 51,598,955 12,597 Benucci GMN et al., 2019
155 Suillus acidus FC148 v1.0 57,731,579 17,622
156 Suillus americanus EM31 v1.0 50,809,076 17,163 Lofgren LA et al., 2021
157 Suillus ampliporus FC55 v1.0 58,334,580 16,527 Lofgren LA et al., 2021
158 Suillus bovinus UH-Sbo-P2 v1.0 47,496,138 13,537 Lofgren LA et al., 2021
159 Suillus brevipes Sb2 v2.0 52,027,859 21,458 Branco S et al., 2015
160 Suillus brunnescens FC94 v1.1 90,082,639 19,330
161 Suillus cf. sibiricus RUI384 v1.0 106,851,732 21,955
162 Suillus cf. subluteus FC464 v1.0 114,207,342 22,673 Lofgren LA et al., 2021
163 Suillus cf. variegatus FC465 v1.0 52,286,509 16,059
164 Suillus clintonianus FC179 v1.0 46,838,326 15,530 Lofgren LA et al., 2021
165 Suillus collinitus S28 v1.0 82,814,809 16,625
166 Suillus cothurnatus VC 1858 v1.0 94,611,779 19,836 Lofgren LA et al., 2021
167 Suillus decipiens EM49 v1.0 62,784,544 16,894 Lofgren LA et al., 2021
168 Suillus discolor FC423 v1.0 60,609,832 16,510 Lofgren LA et al., 2021
169 Suillus elbensis FC64 v1.0 49,992,238 16,813
170 Suillus fuscotomentosus FC203 v1.0 79,655,913 18,512 Lofgren LA et al., 2021
171 Suillus glandulosipes FC488 v1.0 97,749,994 21,314
172 Suillus granulatus S33 v1.0 38,417,259 12,731
173 Suillus grisellus FC184 v1.0 27,163,220 10,170
174 Suillus hirtellus EM16 v1.0 49,942,187 17,067 Lofgren LA et al., 2021
175 Suillus kaibabensis FC96 v2.0 49,971,042 13,919
176 Suillus lakei FC43 v1.0 79,746,074 19,384 Lofgren LA et al., 2021
177 Suillus luteus 16.09.17.av07 v1.0 39,232,458 13,348
178 Suillus luteus UH-Slu-Lm8-n1 v3.0 44,486,502 16,588 Kohler A et al., 2015
179 Suillus occidentalis FC124 v1.0 57,963,537 16,030 Lofgren LA et al., 2021
180 Suillus ochraceoroseus FC498 v1.0 71,521,688 17,772
181 Suillus paluster FC165 v1.0 61,993,750 16,585 Lofgren LA et al., 2021
182 Suillus placidus DOB743 v1.0 55,323,552 15,123 Lofgren LA et al., 2021
183 Suillus placidus S07 v1.0 45,943,075 14,550
184 Suillus plorans S12 v1.0 51,861,001 16,402 Lofgren LA et al., 2021
185 Suillus pseudogranulatus FC45 v1.0 53,289,868 13,672
186 Suillus punctipes FC325 v1.0 48,707,271 14,249
187 Suillus pungens FC27 v1.0 35,632,633 12,148
188 Suillus quiescens AUS222 v1.0 34,152,517 11,697
189 Suillus quiescens AUS223 v1.0 34,515,209 12,072
190 Suillus quiescens FC197 v1.0 44,533,703 12,066
191 Suillus quiescens FC198 v1.0 27,113,927 12,014
192 Suillus quiescens NZ227 v1.0 38,947,259 12,070
193 Suillus sp. nov. FC429 v1.0 45,274,385 14,111
194 Suillus spraguei EM44 v1.0 87,086,403 19,349 Lofgren LA et al., 2021
195 Suillus subalutaceus FC151 v1.0 64,971,567 17,080 Lofgren LA et al., 2021
196 Suillus subaureus MN1 v1.0 57,660,940 15,740 Lofgren LA et al., 2021
197 Suillus tomentosus FC115 v1.0 53,063,458 17,198 Lofgren LA et al., 2021
198 Suillus variegatus UH-Sva-Z1 v1.0 64,862,609 17,072 Lofgren LA et al., 2021
199 Suillus viscidus S02 v2.0 74,730,232 22,317
200 Suillus weaverae EM37 v1.0 42,341,223 15,802 Lofgren LA et al., 2021
201 Terfezia boudieri ATCC MYA-4762 v1.1 63,234,573 12,114 Murat C et al., 2018
202 Terfezia claveryi T7 v1.0 74,471,381 12,765 Miyauchi S et al., 2020
203 Thelephora ganbajun P2 v1.0 36,335,475 12,643 Miyauchi S et al., 2020
204 Thelephora terrestris UH-Tt-Lm1 v1.0 40,733,037 13,338 Miyauchi S et al., 2020
205 Tirmania nivea G3 v1.0 63,133,441 10,591 Miyauchi S et al., 2020
206 Tricholoma matsutake 945 v3.0 175,759,688 22,885 Miyauchi S et al., 2020
207 Tricholoma populinum 2016PMI031 v1.0 136,995,582 19,692
208 Trichophaea hybrida UTF0779 v1.0 144,183,925 13,308 Miyauchi S et al., 2020
209 Truncocolumella citrina FC456 v1.1 59,412,228 17,048
210 Tuber aestivum var. urcinatum v1.0 144,718,305 9,344 Murat C et al., 2018
211 Tuber borchii Tbo3840 v1.0 97,184,993 12,346 Murat C et al., 2018
212 Tuber brumale v1.0 171,435,277 12,382 Morin E et al., 2021
213 Tuber canaliculatum GB_Tcana1 v1.0 119,018,764 13,111
214 Tuber gibbosum GB_Tgibb2 v1.0 73,833,505 10,490
215 Tuber indicum v1.0 110,494,569 11,872 Morin E et al., 2021
216 Tuber magnatum v1.0 192,781,443 9,433 Murat C et al., 2018
217 Tuber melanosporum Mel28 v1.2 124,945,702 10,058 Martin F et al., 2010
218 Tuber melosporum Tmelo v1.0 114,195,480 14,017
219 Tuber mesentericum Tmes4 v1.0 146,226,558 14,712
220 Tulasnella calospora AL13/4D v1.0 62,392,858 19,659 Kohler A et al., 2015
221 Tulasnella calospora UAMH 9824 v1.0 70,372,952 17,081
222 Tulasnella inquilina UAMH 7632 v1.0 87,139,136 15,519
223 Tulasnella sp 1423-3 v1.0 86,803,333 17,847
224 Tulasnella sp. 419 v1.0 56,294,012 13,314
225 Tulasnella sp. 425 v1.0 76,594,216 18,652
226 Tulasnella sp. 427 v1.0 56,306,249 13,260
227 Tylopilus felleus Maridalen v1.0 39,403,162 12,265
228 Wilcoxina mikolae CBS 423.85 v1.0 117,288,895 13,093 Miyauchi S et al., 2020
229 Xerocomellus pruinatus BavarianF63 v1.0 67,272,853 13,871
230 Xerocomus badius 84.06 v1.0 38,390,415 14,938 Miyauchi S et al., 2020