CCMP2436 has been sequenced as part of the Arctic Chromist
project which includes 5 nanoflagellates from divergent lineages.
All of these algae were isolated from the same region of the Arctic
and a goal of the project was to investigate the potential for
genetic signatures of algae living under perennially cold
conditions. The samples for isolation were collected during the
Arctic summer with 24h of light as part of the North Water Polynya
Study (NOW) in Northern Baffin Bay. The surface waters of Northern
Baffin Bay, which is between Greenland and Ellesmere Island, are
typically from -1.7 – 2 °C. All algae were
isolated using a dilution technique where subsamples of starting
sample were placed initially in 6- or 12-well multiwell plates and
transferred to different media when swimming cells were detected
using an inverted microscope. Resulting unialgal cultures have been
maintained in natural aged and filtered seawater amended with
standard media.
The haptophyte (CCMP2436) was originally isolated from a water
sample collected from 11 m depth in June 1998 (76.3208°
N 75.8172° W). The water was collected directly form the
Niskin bottle mounted on a CTD Rosette system on the Canadian Coast
Icebreaker Pierre Radisson and placed into a 50 ml Falcon
tube and kept at 4 °C under blue light until returned to the
land-based laboratory a few weeks later. The culture has been
maintained in seawater at a salinity of 30. Haptophyceae are
phylogenetically and morphologically diverse, and include
coccolithophorids such as Emiliania and also non-coccolith
species in several orders including the Pavlovales. The 18S rRNA
phylogeny indicates that CCMP2436 groups with but branches apart
from described species of Pavlovales in the genera
Pavlova and Diacronema. CCMP2436 is provisionally
considered Arctic specific.
Additional transcriptomes of the culture where CCMP2436 was grown under different culture conditions (urea as a nitrogen source, nitrate as a nitrogen source, low (18) and high salinity (36)) are available as part of the Marine Microbial Eukaryote Transcription Project.
Currently the culture is being taxonomically described and a complete description will be available on publication.
(written by C. Lovejoy, who initially isolated the culture and
has maintained it in culture)
Genome Reference(s)
Dorrell RG, Kuo A, Füssy Z, Richardson EH, Salamov A, Zarevski N, Freyria NJ, Ibarbalz FM, Jenkins J, Pierella Karlusich JJ, Stecca Steindorff A, Edgar RE, Handley L, Lail K, Lipzen A, Lombard V, McFarlane J, Nef C, Novák Vanclová AM, Peng Y, Plott C, Potvin M, Vieira FRJ, Barry K, de Vargas C, Henrissat B, Pelletier E, Schmutz J, Wincker P, Dacks JB, Bowler C, Grigoriev IV, Lovejoy C
Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae.
Life Sci Alliance. 2023 Mar;6(3):. doi: 10.26508/lsa.202201833