Info • Penicillium freii DAOM 242723

Status

The genome sequence and gene models of Penicillium freii DAOM 242723 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.


Genome Assembly
Genome Assembly size (Mbp) 33.55
Sequencing read coverage depth
# of contigs 1924
# of scaffolds 1923
# of scaffolds >= 2Kbp 1339
Scaffold N50 167
Scaffold L50 (Mbp) 0.06
# of gaps 1
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.33, 0.21, 0.19


Gene Models ExternalModels
length (bp) of: average median
gene 1489 1257
transcript 1350 1125
exon 483 254
intron 79 62
description:
protein length (aa) 450 375
exons per gene 2.79 2
# of gene models 11739


Genome Reference(s)

Please cite the following publication(s) if you use the data from this genome in your research:

Wingfield BD, Ambler JM, Coetzee MP, de Beer ZW, Duong TA, Joubert F, Hammerbacher A, McTaggart AR, Naidoo K, Nguyen HD, Ponomareva E, Santana QS, Seifert KA, Steenkamp ET, Trollip C, van der Nest MA, Visagie CM, Wilken PM, Wingfield MJ, Yilmaz N
IMA Genome-F 6: Draft genome sequences of Armillaria fuscipes, Ceratocystiopsis minuta, Ceratocystis adiposa, Endoconidiophora laricicola, E. polonica and Penicillium freii DAOMC 242723.
IMA Fungus. 2016 Jun;7(1):217-27. doi: 10.5598/imafungus.2016.07.01.11

Funding

This project was not sequenced at the JGI.