Info • Penicillium roqueforti FM164

Status

The genome sequence and gene models of Penicillium roqueforti FM164 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.


Genome Assembly
Genome Assembly size (Mbp) 29.01
Sequencing read coverage depth
# of contigs 438
# of scaffolds 48
# of scaffolds >= 2Kbp 48
Scaffold N50 2
Scaffold L50 (Mbp) 7.75
# of gaps 390
% of scaffold length in gaps 3.3%
Three largest Scaffolds (Mbp) 8.61, 7.75, 4.40


Gene Models ExternalModels
length (bp) of: average median
gene 1853 1624
transcript 1713 1482
exon 600 356
intron 77 60
description:
protein length (aa) 414 343
exons per gene 2.85 2
# of gene models 12319


Genome Reference(s)

Please cite the following publication(s) if you use the data from this genome in your research:

Cheeseman K, Ropars J, Renault P, Dupont J, Gouzy J, Branca A, Abraham AL, Ceppi M, Conseiller E, Debuchy R, Malagnac F, Goarin A, Silar P, Lacoste S, Sallet E, Bensimon A, Giraud T, Brygoo Y
Multiple recent horizontal transfers of a large genomic region in cheese making fungi.
Nat Commun. 2014;5():2876. doi: 10.1038/ncomms3876

Funding

This project was not sequenced at the JGI.