Info • Pseudocercospora musae CBS 116634


The Pseudocercospora musae CBS 116634 genome sequence and gene models were not determined by the Joint Genome Institute (JGI) but were downloaded from Ensembl Fungi on Apr 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into MycoCosm. The JGI Annotation Pipeline was used to add the functional annotation to this genome.

Genome Assembly
Genome Assembly size (Mbp) 60.44
Sequencing read coverage depth
# of contigs 3549
# of scaffolds 3331
# of scaffolds >= 2Kbp 2879
Scaffold N50 361
Scaffold L50 (Mbp) 0.04
# of gaps 218
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.28, 0.26, 0.23

Gene Models ExternalModels
length (bp) of: average median
gene 2748 1845
transcript 2594 1716
exon 1023 429
intron 102 59
protein length (aa) 458 367
exons per gene 2.53 2
# of gene models 13129

Genome Reference(s)



This project was not sequenced at the JGI.